Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00029 ATGAAACGTACGCGCAGAGGCGATGCCGATGCCGATGCCGATGCCGATGCGAATGCCGACGGCGAGGGAGTTTCCAAGAAGAAAACGGTGCGAGAGCAGAACCCCGCTACTCGCAGGGTCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCGGCGAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAATTCCACAACATTTTGGACGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCAAGAGAGCAGGTTGCAGATGCAGAGGCACTGTTGGATCTGACGCGCACTCTGGTAGGATCTGTTAGGAGTTTGGCGAACGAGGGTGTCACCCCTTCACAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGTCAAGGCCAAGATTCAATCGATTGGCAGAAACTTGGCATTGCGGTGTCCCCGATATTCCTCTCCGTTCATGGCTCTACTACCATGCTTGGACCTATGGACAACGAAATCAAGAAACGAAGAATCGGAGTGCGCAAACAACGTGATGCTCGCCCTGTCGCAACTACTAGACCTGAACAGCTTGATGAGGCTGGTGCGGTGGAGAAAACTGATACTGACAAAAACATGGCAACGATGTTTAACATCTTGAGGAGGACAAAACGTGTCCGACTTGAAAAATTAATTATCAACAGAAAGTCTTTTGCTCAGACCGTGGAAAATTTGTTTTCTCTGTCATTCCTTGTAAAAGATGGTCGTGCTGAGATCAGTCTCGATGAAAATCGTTTGCACTATGTTTCTCCTAAAAATGCTCCAGCTGCTAACTTAGTATCATCAAAAGAAGTTTCTTATAGTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTTATGAAAGATGTAGTGCCGGAAGGGGAAGAGTTGATGCCACATCGGGTTCAATCTGCTACCGTTGCTTACCCTCAGGAAAGGATGGGTGTGGACGATTCCCAACCTGCTTTGGCTTTAACACCTATCAGGAAGCTATCACGGAATCGAGGACTGGTTGTACAGGAGGAAAGTGTTGTAGAAGAAACTCCTGAATGTGATGAAGAAAATGTTTCCAGAGAAGCGGCTATTCGGAGGTGTAAGCGTAAACTTGATGAAGAAATAGCACATTAG 1146 0.4642 MKRTRRGDADADADADANADGEGVSKKKTVREQNPATRRVIRSQFLKLKTLIGEKRDDLMNTESDKFHNILDEFDKLHDQVEKPREQVADAEALLDLTRTLVGSVRSLANEGVTPSQFVSSLLIRYGQGQGQDSIDWQKLGIAVSPIFLSVHGSTTMLGPMDNEIKKRRIGVRKQRDARPVATTRPEQLDEAGAVEKTDTDKNMATMFNILRRTKRVRLEKLIINRKSFAQTVENLFSLSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYSHFVFRYDYQDWKLMKDVVPEGEELMPHRVQSATVAYPQERMGVDDSQPALALTPIRKLSRNRGLVVQEESVVEETPECDEENVSREAAIRRCKRKLDEEIAH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00029 381 Pfam Nse4 C-terminal 217 303 IPR014854 -
Vian3g00029 381 MobiDBLite consensus disorder prediction 1 36 - -
Vian3g00029 381 PANTHER UNCHARACTERIZED 2 360 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vian3g00029 381 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00029 Vian-Chr3 239604 241761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00029 38 375 Non-SMC Element family AT1G51130 51.149 1.72e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00029 K22825 - gmx:100792117 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00029 3 239604 241761 Vian3g00029 3 239604 241761 ECH