Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00008 ATGGAGATGTCATCACGAATGAATGAGGTGGAAGATGTTTCTCCTGCAGATGGCGTCCCTGAGCTGGCCAAAGAGTTGGAGCGTATGGTGGATAGATACAGCAGCGGGAGGAGCAATTTTGTTTGGGAGGATGAGGAGGCAGAAGACGAGGACATGTCCCTCTTGCAATTCCTAGCCATGGTGGATCGCATCTCCGCTGCTTCGGCTTCCTTATCATCTTCTTCTTCCTCCTCTTCTACTGTGATTGCCTTCCAGGAGGAGTTGGACCAGATCGCCTTCGTCCTAGAAAAAGCAATGTCCCTACTAGAGAAACATCTTTCTCATCTTCTACACGACGACCCCAAATCTAAACCACCCAACAAATCCTTCTCTTTTAATTCTCCTTCATACCTTTCTTCTGTTCCCGAGTCTCCCTCCCCTAGACCACCACAGCAAGATCACCACACCCAAGACCCCTTTGATTTCTCTCCGCAAAAGATTTCTACTTTGAACAAGATCGCCACTGCCATGATCTCAGCCGGCTACCACATCGAGTGCTACTTGGTTTTTGCTAGTTTCAGGCGAACTGCTTTCAGAACCACGCTCCAAACATTTGGATTCGGGAACACCAGGATGGAAGATTTGTGTAAAATGTCATGGGAATCCCTTGAAGCTGAAATTGCAACGTGGAATCAAGTGGTTTGGCACTGCACCACCGTGCTTTTCAAGTCTGAAAGAAAACTTTATAAATCCATCTTCCCCGATCATCCCTCCATTTCTCAAAACTTGTTCTGCGATCTTGCACGACAAGTCATCGTCCATTTGCTCAACTTTGCACAGTGTGCTGTTCTAACAAAATGGACCACTGAGAAACTTTTCAAATTTCTAGATATGTACGAGACCCTGAGGGAAGACGTTATCGGAGGTTCCTACCTGGAGTCGGGAGCTAAGGAGCTGGCGTATGAGGCAGGCACCGCAAGGGACATGATAGTAGAGGCTATTATGGCCATGTTTTGTGATCTGAAGAACTCGATCAAGAACGACAACGAAAGGATTCCTGTTCCGAACGGTGCAGTGCACCCCTTGACTCGGTATGTAATGAACTATCTAAAATATGCATGCGAGTACAAGGATACGTTGGAGGAAGTGTTTGAACAAGGAGAAAGGATAAATGAGAAGGAGGTGAACGAAGTGGAAGATGTAGAGAAGCGGAAGAATTCGGGTTTTGCAGTGCAGTTGATGAGCATAATGGATCTTTTGGATGCAAATGTGGAAAGGAAATCACAGTTGTACAGGGACGATGCTCTGAGGTATTTTTTTCTGATGAACAACGGGAGATACGTAGTGCAGAAGGTGAAAGGGTGTGAGGAGCTTCACGAGCTGATGGGTGACAACTGGTGCAGGAGGAGGCAGTCGGGTCTGAGGTTGTACCACAAGTGTTATCAGAGGGAAACGTGGACTAAGGTGCTGCAGTGCCTGAAGCCGGAGGGGCTACAGCAGGGGACTGGGAATAAGGTCTCCAAACAGCTCGTGAAGGAAAGGTTCAAATGCTTCAATCGGATGTTTGAAGAGATACACAAGTGTCAGAGTTGTTGGATGGTGAGCGATCAACAACTGCAGTCGGAACTCAGAGTTTCCATCTCCTCTTTGGTCATCCCCGCCTACCGCTCCTTCGTTGGAAGATTCAAACAACATCTTGAATCAACCAGACACATCGACAAGTATATCAAGTACCACCCAGACGACATTGAGCTTTTGATTGATGATTTCTTTGCCGGTAATGCTGCCTCCATGCCTCGGAGGAGGTCATGA 1791 0.4729 MEMSSRMNEVEDVSPADGVPELAKELERMVDRYSSGRSNFVWEDEEAEDEDMSLLQFLAMVDRISAASASLSSSSSSSSTVIAFQEELDQIAFVLEKAMSLLEKHLSHLLHDDPKSKPPNKSFSFNSPSYLSSVPESPSPRPPQQDHHTQDPFDFSPQKISTLNKIATAMISAGYHIECYLVFASFRRTAFRTTLQTFGFGNTRMEDLCKMSWESLEAEIATWNQVVWHCTTVLFKSERKLYKSIFPDHPSISQNLFCDLARQVIVHLLNFAQCAVLTKWTTEKLFKFLDMYETLREDVIGGSYLESGAKELAYEAGTARDMIVEAIMAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEEVFEQGERINEKEVNEVEDVEKRKNSGFAVQLMSIMDLLDANVERKSQLYRDDALRYFFLMNNGRYVVQKVKGCEELHELMGDNWCRRRQSGLRLYHKCYQRETWTKVLQCLKPEGLQQGTGNKVSKQLVKERFKCFNRMFEEIHKCQSCWMVSDQQLQSELRVSISSLVIPAYRSFVGRFKQHLESTRHIDKYIKYHPDDIELLIDDFFAGNAASMPRRRS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00008 596 MobiDBLite consensus disorder prediction 1 21 - -
Vian3g00008 596 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 585 IPR004140 GO:0000145|GO:0006887
Vian3g00008 596 MobiDBLite consensus disorder prediction 129 155 - -
Vian3g00008 596 Pfam Exo70 exocyst complex subunit 223 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian3g00008 596 SUPERFAMILY Cullin repeat-like 49 584 IPR016159 -
Vian3g00008 596 Gene3D Exocyst complex component Exo70 41 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00008 Vian-Chr3 54436 56226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00008 3 595 EXO70 exocyst subunit family AT5G13150 46.795 6.28e-177 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00008 K07195 - pvu:PHAVU_007G000900g 951.429