Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03258 ATGCCACAGCCTTTGCCGCATCAACCACGCCGGCCACCGAAAACCGAGAATCAGGGCGGCGCCGATCGCCATCAAGGCCAACGCCGGCGACTGCTCCGACCTCTCTCTCCCTCTCTTCTTCGCGCGCGAGCTTCTGCAAAACCCTTTCTCCCCACCCGAGCTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTTTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGAAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCAGATGCGGCTACTTGGCCGGAGCCATTGGCGGTGCAGGCTCAGGACTCGTTGAGGGCGTCAAGGCCTTTGAGTCCGGGGACACAATGAAGCTCCGAATCAACCGCGTTCTGAACGCAGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTAGGGTTACTCTACGCTAAAATCGAGAGCAGAATCCAGGCGGCAAGAGACGCAGACGACGTATGA 519 0.5992 MPQPLPHQPRRPPKTENQGGADRHQGQRRRLLRPLSPSLLRARASAKPFLPTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTRCGYLAGAIGGAGSGLVEGVKAFESGDTMKLRINRVLNAAGHSGRVWGNRVGILGLLYAKIESRIQAARDADDV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03258 172 MobiDBLite consensus disorder prediction 1 37 - -
Vian2g03258 172 Pfam Tim17/Tim22/Tim23/Pmp24 family 98 171 - -
Vian2g03258 172 PANTHER TIM23 64 171 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03258 Vian-Chr2 52819079 52820937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03258 52 172 Chloroplast and Mitochondria Gene Families AT1G72750 63.710 1.97e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03258 K17794 - gmx:100813158 204.142