Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03203 ATGATGTTGAAATCCTTATGGAAAAGCCTGATAAGCCTTCAACATAAGTGTGTGAAGAAGCAAAAGAGTGAAGTTGATGGAAGTGTGTCAGTGCATGGTGAAGAAGACTTGGTCGTTTTGCCTGTGCAGTGTTCCAACTGTCGCATAGAAGAAACCAAACAATGCAATTGTGACCATACTCATGTAGCAGAAGATGCAAATGTCCACGCTCAGCGTGATGTTAACTCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCGTAGGTTTGGGGCAACTATCAACTCCATATGCAGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGACTAGGTGTGATGTGTGCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAACATGCGTTTGGATCAAAAGGAAGGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGAACACAGTCTTTCTGGGGACAAATCTCAAGCACCACTTCCCCAAATTCTCCTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCATTGCCCTCCCTAGTTTGTGGATCAGAGACCTCTCTTCCATATCTTTCCTTTCAACACTTGGCATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACATTGTTTTCCCCGAATTATACACATCCATGAAAGACCCTTCAAAATTTACCAAGGTTTCTATTGTGAGCTTCGCAGTGGTTACAGCAATTTACACGACACTGGGGTTCATGGGTGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTGACAAAGGTTGCTCTGTGGGCAACCGTGGTGGCACCAATGACCAAATACGCGCTTGAATTCATACCATTGGCAATTCAACTCGAACATGCTCTTCCAAGCACCATGAGTGGCAGAAACAAGATGATTATTAGGGGTTGCGTGGGTTCATTTTCACTTTTGGTCATACTAACCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTAAGTCTCACTGGTTCCCTTGTCAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGGTCAAATATCAAACCTTGTCTTGCTCCTTAACCTCTCTCTCATCACATTTGGCTTTCTTCTTGCTCTCATGGGCACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTATTTTTGCAGTTATTGATGTGTTTATTGTCACAGTGATTGCACTTGTCTTTTGCGTGTGGCTTCAGACGAACTTTTTCACGGGTTCCATTCCAGATTTGTCAAATAGCACCGCTTTGTTTGATTTGCAGCTAAATGACGAGTTAACCGATGAGGTTCCATCTTCTCTCATATCCTTTTCTAGTTTGCAGAACGTCTCTTCAGACGACAATTTTTTTCAGGGTCTCGTTCTTTCGTTTGAAATGGGTATGAATGTCACTTTTGATTCGAATAAATTTTATAGGAATGACTCTCGACTTTGTGATTCTCGCGTCACCACTTTACTTGATATTGCTAAACATTTTGCCTGTCCCTTTCAGTTTGCAAGTTTCTGGTTTTGTAATGATCCTTGTGAGGATTGA 1800 0.4256 MMLKSLWKSLISLQHKCVKKQKSEVDGSVSVHGEEDLVVLPVQCSNCRIEETKQCNCDHTHVAEDANVHAQRDVNSNSSFTHAVINMVGMLVGLGQLSTPYAVVSGGWVSAFLLVGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIIYMEIFMSLVSYTISLHDNLNTVFLGTNLKHHFPKFSSSQFLTVVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIVSFAVVTAIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFIPLAIQLEHALPSTMSGRNKMIIRGCVGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKTCWGQISNLVLLLNLSLITFGFLLALMGTISSSKLLLKSIFAVIDVFIVTVIALVFCVWLQTNFFTGSIPDLSNSTALFDLQLNDELTDEVPSSLISFSSLQNVSSDDNFFQGLVLSFEMGMNVTFDSNKFYRNDSRLCDSRVTTLLDIAKHFACPFQFASFWFCNDPCED 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03203 599 Gene3D Ribonuclease Inhibitor 475 567 IPR032675 -
Vian2g03203 599 Pfam Transmembrane amino acid transporter protein 77 458 IPR013057 -
Vian2g03203 599 PANTHER AMINO ACID TRANSPORTER 69 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03203 Vian-Chr2 52414492 52418906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03203 44 471 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.907 1.20e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03203 - - gmx:100790897 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03203 2 52414492 52418906 Vian2g03203 2 52414492 52418906 ECH