Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03182 ATGGGTTGGCCCGTATTAGGGACCCTGCCTGAAATGGGCTCTCTGGCCCATACAAAACTTGCTTCCATGGCCACTTCCCTGAAAGCAAAGAGGCTCATGGCACTCAGTTTGGGAACCAACCGGGTTGTTATTAGCAGCCACCCGGAGACCGCGAGAGAAATTCTTTGCGGGTCAGGCTTCTCAGACCGACCCGTTAAAGAATCGGCAAGAACGCTGATGTTTGAGCGTGCCATCGGATTCGCTCCGTATGGGACATATTGGCGTCACCTTCGTAAGGTGGCGACCATGCACATGTTCTCTCCGAGGAGGATTTCTGATCTGGAAAGCCTCCGACAGAGAACGGCGGCTGATATGGTGAGGAAAACGTGGAAGGAGATGGAGATGAAAGGGGTGGTGGAGGTTCGAGGGATATTGCATGAAGCGTCCCTGAGGACCATGTTGGAGAGTGTTTTTGGGATCAATAATAGTTGTATAGAATCAGAAAGAGAAAAGGTGTTGGGAGATATGATCAAGGAAGGGTATGAGTTGATTGCCACGTTTAACTGGGAAGACTATTTCCCCTTCAGGTTTTTGGACTTTCATGGCGTGAAGAGAAGGTGTCACGGATTGACGACTAAGGTTAAGAGTGTGGTTGGTGAGATTGTGGAAGAAAGAAAAACATGTGAAAAGCTGGTTGGGCAGACTGATTTTCTCAGCGCTTTGTTATCGTTGCCGGAAGAAGAACGAATAGGTGAATCAGATACAGTAGCTATCTTATGGGAAATGTTGTTCCGGGGAACAGACACGGTTGCTATTCTTTTGGAATGGATTATGGCCATGATGGTTGTACACCAAGATGTTCAGATGAAAGCCCGCCAAGAGATTGACACGTGCATTGGCCGGAATAGTCACGTGCGAGACTCTGACATTCCGAATCTCCCTTACCTTCAAGCCGTGGTGAAGGAGGTGCTTCGGTTGCACCCACCGGGCCCATTGCTTTCATGGGCTCGTCTCGCGACCCATGACGTTCACATTGACAAAGTCCTGGTGCCTGCAGGCACAACTGCAATGGTTAACATGTGGGCCATATCACACGACTCATCGATCTGGAAGGACCCATGGGCCTTCAGGCCCGAACGATTCATTGATGAACAAGTGTCCATCATGGGGTCAGACATGAGACTTGCACCGTTTGGTGCGGGACGTAGGGTGTGCCCTGGCAAAACATTGGGCTTAGCCACGGTTCATCTGTGGCTTGCAGAGTTTCTTCACCGATTCATATTGGTTCCGGCGCAACCTGTGGATCTTTCAGAATGCCTTAAGCTCTCTCTGGAAATGAAAAAGCCATTACAGTTCAAAGTGATCCCTAGGTACTCTTGA 1359 0.496 MGWPVLGTLPEMGSLAHTKLASMATSLKAKRLMALSLGTNRVVISSHPETAREILCGSGFSDRPVKESARTLMFERAIGFAPYGTYWRHLRKVATMHMFSPRRISDLESLRQRTAADMVRKTWKEMEMKGVVEVRGILHEASLRTMLESVFGINNSCIESEREKVLGDMIKEGYELIATFNWEDYFPFRFLDFHGVKRRCHGLTTKVKSVVGEIVEERKTCEKLVGQTDFLSALLSLPEEERIGESDTVAILWEMLFRGTDTVAILLEWIMAMMVVHQDVQMKARQEIDTCIGRNSHVRDSDIPNLPYLQAVVKEVLRLHPPGPLLSWARLATHDVHIDKVLVPAGTTAMVNMWAISHDSSIWKDPWAFRPERFIDEQVSIMGSDMRLAPFGAGRRVCPGKTLGLATVHLWLAEFLHRFILVPAQPVDLSECLKLSLEMKKPLQFKVIPRYS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03182 452 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS P450 superfamily signature 389 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 SUPERFAMILY Cytochrome P450 2 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 FunFam Cytochrome P450 78A5 1 450 - -
Vian2g03182 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 391 400 IPR017972 GO:0005506|GO:0016705
Vian2g03182 452 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 26 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 Pfam Cytochrome P450 3 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g03182 452 PANTHER CYTOCHROME P450 78A7-RELATED 2 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03182 Vian-Chr2 52270239 52271682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03182 13 450 Cytochrome P450 AT1G13710 54.586 4.04e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03182 - - ccaj:109797962 751.51