Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03164 ATGGAGGAAGAAATCAAATCCGAATTCAAAAGCAGCGGTTTCGACGTCGAAGACGAACAAGAAATTCTCAGAAAATGTGTCACTTTCTGCACCAACTACAGTTTCACTCCTTCTGAACTCGTCTCAAGCTGGGAAGTTTATTACCTCAATAGGTGTATTGCTCGAAACACTTCTGTTCCTCTTATGAAAAAATATAAAAGTGTTTTGCTGAATGAACCAGTTGTAGAGAGTGCCGAAATTGATGGCTTTCTGTTGCAGCTGCAAAATGAGAAGAAAGAGGACAGTGTAAAAGAAAGGGAAGAAGGTGGCTTGCATATCAAGATTGTGGTAAGATTCAGTCATACTATAAATGTGTTTGTTTTTCTCTATATCCTTGTAGAGAATGGGAAGCAGGAACCTCATCACGAGTATACCGAGAATGATGAAGATGATGTTGTCAGAAGAGTTCCACAACGTGAAAGGTGTTCATTGGTCATTCATGGATCAGGACTCAAACCGTGTTGTAAATTCATGTATGATAGAATGGAGGATAGGCTTAATGCAATAGAAAACCGAATTAGAAAACATACAAGGGCATTTGTAGCTTCTGGTCTCTATGAAGAACCAACAGACCCCACATCTGCTTCACAGAGGAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGCCGAAGGACGTTTAAATGAGAAGTCAGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTTGACTTGCAACGTTTAAACCATTATTCAATTTTTCCTGGCCAGGTAGTTGGTATTGGAGGACATAATCCTAGTGGGCATTGCTTTATTGCATCTAAATTGGTGGATTCTATACCTATAATATCTGTTGCTGATGAGAATTTGAATCCTCTGAAGAAGCAAGCTATTGATAAGGAGAGTCAGTCTACTGATACGATTTATAAACAGAGAGAGTTATCGATGATTATTGCCGCTGGTCCCTTTACTACGACAGACAATTTATTGTTTGAGCCTCTTACAGAACTGCTGCAATATGCAAAACGAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTGTGGATTCTGAGCTCCCAGATATTAAGAAAGGAACCGTAGACAGGAGTTTTGATGAAATATTTCATTCTGAAATCGTGAGGAAGTTGGAAGATTATGTAGAGCGCGTGGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAACCATGATTTTGTGTTTCCTCAGCCCGCACTGGAAATCAATTTATCTGATTTCAAATCTCAGATAGTCAGTCTCGCTAATCCTGGAATCTTTGAGGCAAATGAGGTTAAGGTTGGTTGCTGCACCGTGGATGTTCTCAAGCAAATCAGCGGAGAAGAGATATCACGAACTGCAGCAGATGGAAAACCAATTGATCGTATGAGTAGACTTACAAACCATATCCTCAACCAACAAAGCTTCTATCCACTTTACCCACCCGCAGAAAGTGTCCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTAAACTTTCATTGGTTCCGGACGTACTTATCCTACCTTCAGACATCAAGCACTTTGTCAAGGTACTTAGCAGCGAAAGTGAAGGCATAAATAACACGAAATGCATAGCTGTCAATCCGGGTAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTCGAGCTTCATTATGGTGGGGGTTCCAATCTAATTAACGCTTCAATTGTTGGCATATGA 1749 0.4145 MEEEIKSEFKSSGFDVEDEQEILRKCVTFCTNYSFTPSELVSSWEVYYLNRCIARNTSVPLMKKYKSVLLNEPVVESAEIDGFLLQLQNEKKEDSVKEREEGGLHIKIVVRFSHTINVFVFLYILVENGKQEPHHEYTENDEDDVVRRVPQRERCSLVIHGSGLKPCCKFMYDRMEDRLNAIENRIRKHTRAFVASGLYEEPTDPTSASQRSIFAVGMICCDAEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSIFPGQVVGIGGHNPSGHCFIASKLVDSIPIISVADENLNPLKKQAIDKESQSTDTIYKQRELSMIIAAGPFTTTDNLLFEPLTELLQYAKRRPPQLLVLLGPFVDSELPDIKKGTVDRSFDEIFHSEIVRKLEDYVERVGSGTRVLLVPSIRDANHDFVFPQPALEINLSDFKSQIVSLANPGIFEANEVKVGCCTVDVLKQISGEEISRTAADGKPIDRMSRLTNHILNQQSFYPLYPPAESVPLDFSLAPEALKLSLVPDVLILPSDIKHFVKVLSSESEGINNTKCIAVNPGRLAKGEGGGTFVELHYGGGSNLINASIVGI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03164 582 Gene3D - 1 64 IPR043034 -
Vian2g03164 582 Coils Coil 172 192 - -
Vian2g03164 582 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 568 IPR016722 -
Vian2g03164 582 PIRSF DNA_pol_alpha_2 128 570 IPR016722 -
Vian2g03164 582 PIRSF DNA_pol_alpha_2 1 107 IPR016722 -
Vian2g03164 582 Gene3D - 300 468 - -
Vian2g03164 582 Gene3D - 472 574 - -
Vian2g03164 582 Pfam DNA polymerase alpha/epsilon subunit B 322 532 IPR007185 GO:0003677|GO:0006260
Vian2g03164 582 FunFam DNA polymerase alpha subunit B 302 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03164 Vian-Chr2 52123261 52128573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03164 2 582 Core DNA Replication Machinery Family AT1G67630 52.344 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03164 K02321 - gmx:100797769 819.305