Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03158 ATGTATTTGTCGGAGAAGCCGCGTCCAATCGATTTCTACAAGGAGGAAGGCGCGCGCGACATGATGATCGAGGTGGTCTCCAACGGTGAACTCCCGCCTCCGCCGCCGCACCACCCGCCGCCGATGATCCTCGGCGAGAGCAGTGGAGAAGACCCCGAGGTGGAGATCAAGGCCCCCAAGAAACGGGCCGAGACGTGGGTACAGGACGAGACGCGCTCGCTCATTGGCCTCCGCCGCGAGATGGACGCGCTCTTCAATACCTCCAAGTCCAACAAGCACCTGTGGGAACAGATATCCGCCAAGATGAGAGAGAAGGGTTTTGATCGCTCTCCCACCATGTGCACCGATAAGTGGCGCAACCTCCTGAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGGGGAGGCAGTGGCTCTGCTAAGATGTCGTATTACAAGGAGATTGACGAGATCCTCAGAGAGAGGAACAAGAACGTGCAGTACAAGAGCCCCACTCCTCCGCCAAAGGTTGATTCTTTCATGCAGTTTGCTGATAAAGGTATTGATGATACTAGCATCTCTTTTGGACCTGTAGAAGCTACTGGAAGACCAACACTTAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCTGGCGGAGTCCCTCCTTGGAATTGGAGAGAGACTTCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGTGTGATTATACAAGACGAATAGGTATTGACGGCACTCCAGAAGCCATCAAAGAAGCAATCAGAGCTGCTTTTAGGTTGAGAACTAAACGCACATTTTGGTTGGAGGATGAGGACCAGATTATCCGAAGTATTGACCGTGAAATGCCTATTGGAAGTTACACTCTTCACCTTGATGAAGGAATGGCCATTAAATTATGTCTCTATGACGAGTCTGAGCACCTTCCTGTGCATACTGAAGATAAGGTATTTTACACTGAAAATGATTACCGTGATTTTCTGACCCGGCGGGGTTGGGTATGTCTAAGAGAATTTGACGGATATAGAAATATTGACAATTTGGATGATCTTCGACCTGGTGCTATATATCGTGGTGTGAGTTGA 1134 0.4929 MYLSEKPRPIDFYKEEGARDMMIEVVSNGELPPPPPHHPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSYYKEIDEILRERNKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEATGRPTLNLERSLDHDGHPLAITTADAVAAGGVPPWNWRETSGNGGESQSCCGRVISVKWCDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPIGSYTLHLDEGMAIKLCLYDESEHLPVHTEDKVFYTENDYRDFLTRRGWVCLREFDGYRNIDNLDDLRPGAIYRGVS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03158 377 SMART sant 62 124 IPR001005 -
Vian2g03158 377 MobiDBLite consensus disorder prediction 27 53 - -
Vian2g03158 377 Gene3D - 66 128 - -
Vian2g03158 377 CDD GT1 64 129 - -
Vian2g03158 377 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Vian2g03158 377 PANTHER FI21293P1 46 351 - -
Vian2g03158 377 Pfam Myb/SANT-like DNA-binding domain 65 150 IPR044822 -
Vian2g03158 377 FunFam trihelix transcription factor GT-1 66 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03158 Vian-Chr2 52082522 52086442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03158 20 376 Trihelix Transcription Factor Family AT3G25990 69.126 2.80e-179 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian2g03158 Myb_DNA-bind_4 1.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03158 - - ccaj:109807736 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03158 2 52082522 52086442 Vian2g03158 2 52082522 52086442 ECH