Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03140 ATGGCAGCTCTGTTACCTTGCGCGCCCAACATAGTCTCTGCTCCGTTCGGGAACCGGAGCACGAGCCGCCTTCCCAACCGTCCTCAATCCCACGCTTTCTCCGGTTCGACCAGGCACTTTCTTCGCGGCTCTCTATCCGTCGCCCGGTTCGGATTCAAACCCGAATTCTTGCCCGAGCCGGAGCACGCTGAAGGCGTGCTCAGAGAACTGTTTGGTCGAGCGGAGGGACTTCTTTACACGATTGCAGACGCCGCCGTATCTTCTTCTTCCGACACGGTTGCTGCTTCCGCCACCGCCAAACAGAGCAATGATTGGCTTTCCGGAATCACCAATTACATGGAGACGGTTCTTAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCCCTAACCAAAAAGCAGGTAGAATCCGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGACTTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACCATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCTGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATCGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTGCCCCTCCCCTTGGATGGTCAGATACATTGGCTTATCTGGTCTTGCCGGTGTTGCTAATCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTGTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGGACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATCAAAAATGACGGAACCCGGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAATAGTGGAAGAAGCCGGCCAAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGAAAGGAGAAGACAACAAAGAGAAGAAGAAGAAAAAATGAAAGGCATGGAAACAGCAGCTAGAGAGACTGAAGTAGATGATAGTCACGTGACACTTGAGAAAACTGGAGGTGATTTAACTGTTGAAAAATCTCGGTCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTGGTAAATGGCAACTTATTAAGTACAGACTTAGAGGGAAATCAGAATTTTACATCTACATCTGAGACACAAAATAATGAAGGCTCTGCTCATTTCAACAATGATGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACTGCAAACAGACAACCTCCTGCAGAAGATTCAGATCGCATGACAAAGGATTGA 1611 0.4569 MAALLPCAPNIVSAPFGNRSTSRLPNRPQSHAFSGSTRHFLRGSLSVARFGFKPEFLPEPEHAEGVLRELFGRAEGLLYTIADAAVSSSSDTVAASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERLQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGAPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLQKLGGAKNPVRQVPDDIIKNDGTRVQKSISKLNSTIVEEAGQSEKTSEGPQPGDRFKQLKEQEERRRQQREEEEKMKGMETAARETEVDDSHVTLEKTGGDLTVEKSRSVGSDTDPSISGVVNGNLLSTDLEGNQNFTSTSETQNNEGSAHFNNDEINEKNSDKEPREVLTSTTTANRQPPAEDSDRMTKD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03140 536 MobiDBLite consensus disorder prediction 498 512 - -
Vian2g03140 536 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Vian2g03140 536 MobiDBLite consensus disorder prediction 395 448 - -
Vian2g03140 536 MobiDBLite consensus disorder prediction 384 536 - -
Vian2g03140 536 PANTHER OXA1 82 411 IPR001708 GO:0016020|GO:0032977
Vian2g03140 536 MobiDBLite consensus disorder prediction 513 527 - -
Vian2g03140 536 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Vian2g03140 536 MobiDBLite consensus disorder prediction 450 497 - -
Vian2g03140 536 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Vian2g03140 536 Coils Coil 401 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03140 Vian-Chr2 51951390 51957822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03140 70 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.897 3.91e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03140 K03217 - gmx:100802546 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03140 2 51951390 51957822 Vian2g03140 2 51951390 51957822 ECH