Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g03084 | ATGACGCAGCAGAATGTGGTAGTGTCTGACACCAAATCTGGAGTTTCCCTAACAGTTTTTCCAACACCTGCACAAAAAAAGCCACCGGCAGCACCAGGAGGGTACATTTCTATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGACCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCATCTCCTACCCATCTTAAATCCGCACCTTCTTTCTCTCAGGAGCAAAACTCTTGGATTCTTCACCATCCCTCCGCATTAGACATGTTTGACCAAATTATTGATGCGTCAAAGGGAAAACAAATTGTCATGTTCCTCGACTATGATGGCACACTTTCCCCAATTGTTGAAGATCCTGACCGTGCTTTCATGTCTCACTCGATGAGGAAAACAGTGAAGAAACTTGCTAGGTGTTTTCCTACTGCCATAGTGACCGGAAGATGCAAGGACAAGGTATACAATTTTGTGCAGTTGGCAGAGCTATATTATGCAGGAAGCCATGGCATGGATATTAAAGGGCCAACAAGAAGCTCCAAATACAACAAAGATAGCAAAGCTGAGGCAATTCTTTTTCAACCTGCCAGCGATTTTCTTCCCATGATAGATGAGGTGTACCAACAATTGGTTGAGAAGACCAAATCAACTCCTGGAGCCATGGTTGAGAACAACAAGTTCTGCCTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAGTGACCTGGCACGCCAAGTGAAATCAGTTTTAAAGGACTACCCGAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCGACTATTAAATGGGACAAAGGGAAGGCCCTGGAATTTTTATTAGAGTCCCTTGGTTTGGCCAATTGCAGTGATGTATTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCTTTCAAGAAATTGAGAGACAGAGGACAAGGTTTTGGTATTCTTGTCTCCAAATTTCCGAAAGACACAAGTGCATCTTACTCTTTACAAGAACCAAACGAGGTGATGAGCTTTCTTCAACGCTTGGTGGAGTGGAAACATATGTCCCAACGAGCACGTTCCCGGGTGTAG | 1104 | 0.4384 | MTQQNVVVSDTKSGVSLTVFPTPAQKKPPAAPGGYISISRRRVLKNLEINGDQRINAWVESMRASSPTHLKSAPSFSQEQNSWILHHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVEDPDRAFMSHSMRKTVKKLARCFPTAIVTGRCKDKVYNFVQLAELYYAGSHGMDIKGPTRSSKYNKDSKAEAILFQPASDFLPMIDEVYQQLVEKTKSTPGAMVENNKFCLSVHFRCVDEKKWSDLARQVKSVLKDYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEVMSFLQRLVEWKHMSQRARSRV | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g03084 | 367 | Gene3D | - | 210 | 366 | IPR023214 | - | |
Vian2g03084 | 367 | Gene3D | - | 106 | 204 | IPR023214 | - | |
Vian2g03084 | 367 | PANTHER | TREHALOSE 6-PHOSPHATE PHOSPHATASE | 27 | 362 | IPR044651 | GO:0004805|GO:0005992 | |
Vian2g03084 | 367 | CDD | HAD_TPP | 107 | 347 | - | - | |
Vian2g03084 | 367 | FunFam | Trehalose 6-phosphate phosphatase | 198 | 274 | - | - | |
Vian2g03084 | 367 | Pfam | Trehalose-phosphatase | 109 | 343 | IPR003337 | GO:0003824|GO:0005992 | |
Vian2g03084 | 367 | SUPERFAMILY | HAD-like | 107 | 356 | IPR036412 | - | |
Vian2g03084 | 367 | NCBIfam | trehalose-phosphatase | 104 | 354 | IPR003337 | GO:0003824|GO:0005992 | |
Vian2g03084 | 367 | FunFam | Trehalose 6-phosphate phosphatase | 204 | 363 | - | - | |
Vian2g03084 | 367 | FunFam | Trehalose 6-phosphate phosphatase | 106 | 193 | - | - | |
Vian2g03084 | 367 | NCBIfam | HAD-IIB family hydrolase | 108 | 319 | IPR006379 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g03084 | Vian-Chr2 | 51417423 | 51419815 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g03084 | 102 | 353 | Trehalose Biosynthesis Gene Families | AT1G70290 | 26.199 | 2.54e-09 | 57.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g03084 | K01087 | - | gmx:100794430 | 684.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g03084 | 2 | 51417423 | 51419815 | Vian2g03084 | 2 | 51417423 | 51419815 | ECH |