Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03083 ATGGATATATACAATAACAGTAGCATCGTGCTGTCAGATTTCTTAGACCCCTGCAATGATCAAGAGCTTATGAAAGCACTTGAACCTTTTATGAAAACTGATTCTTCCATAACTTACCCTTCCTTATCTTCTCCAAACTTCTCCTCAAACTATGACCAAAAGCCTTCCATCAAACTCAACCAACTCACCCCATCTCAAACGTTCCAGATTCAAGCCCAAATCCAGGTTACACGGGCCCAGTTTCTTAGCCCAAAGCCCGTTCCCATGAAGCAAGTGGGTGGTCGTGTTCTTTCCAAGCCCACAAAGCTTTACCGTGGGGTGAGGCAGAGGCACTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCCAAGAATCGCACTCGTCTCTGGCTTGGTACATTCGAAACCGCTGAAGAAGCTGCTTTGGCATACGACAACGCAGCGTTTAAGCTCAGAGGAGAAAACGCCAGGGTCAACTTCCCTCATCTACGTCACCATGGACCAAGCGTCTATGGTGAGCTCGGGACCTACAAGCCTCTCCCCTCTGCAGTGGACGCCAAGCTCGAAGCCATTTGTAAAAGCTTGGCCATGACTACACCCAAGGAAGAAACAGCAACAACATCGGAGTTTGAGGATGTTAAGGTGGGGATTCAAACAACATCCTCGCCCTTGTCGGATGAATATTCTTCCTCCTCTTCTTCTGCTGGCTCCTCTTCACCCGAATCCGATATCACTTTCTTGGATTTCTCGGATTCTTATGAAGCAATGGACAATCTTGGGTTGGACCTTGAGAAGTACCCTTCTGTGGAGATTGATTGGGCAGCTTTATCTGAGTCATCATGA 840 0.481 MDIYNNSSIVLSDFLDPCNDQELMKALEPFMKTDSSITYPSLSSPNFSSNYDQKPSIKLNQLTPSQTFQIQAQIQVTRAQFLSPKPVPMKQVGGRVLSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGENARVNFPHLRHHGPSVYGELGTYKPLPSAVDAKLEAICKSLAMTTPKEETATTSEFEDVKVGIQTTSSPLSDEYSSSSSSAGSSSPESDITFLDFSDSYEAMDNLGLDLEKYPSVEIDWAALSESS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03083 279 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 23 276 - -
Vian2g03083 279 MobiDBLite consensus disorder prediction 220 241 - -
Vian2g03083 279 Pfam AP2 domain 104 153 IPR001471 GO:0003700|GO:0006355
Vian2g03083 279 FunFam Ethylene-responsive transcription factor 2 102 161 - -
Vian2g03083 279 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
Vian2g03083 279 Gene3D AP2/ERF domain 103 162 IPR036955 GO:0003700|GO:0006355
Vian2g03083 279 SUPERFAMILY DNA-binding domain 103 161 IPR016177 GO:0003677
Vian2g03083 279 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Vian2g03083 279 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Vian2g03083 279 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Vian2g03083 279 CDD AP2 102 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03083 Vian-Chr2 51407280 51408119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03083 1 279 AP2-EREBP Transcription Factor Family AT4G39780 50.000 1.81e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian2g03083 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03083 K09286 - gmx:106796800 384.8