Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03077 ATGTGCAGGAGCTCTAGTAACTCAGAGATGGTAGCTTCGAAGAAAACCACGTTAGAAGAGGTTTTGGACATTGAGACCAGCATGTGTCGGTCTCAGTGGGTGTTAAATCCTCCAGATCCACCCTCCATGCCGCGTCAGGTCCTCGACAACGTCAAGGACATCCTCTTACCGCATCCTCAACCAAACACATTCTCTTCTCTCAGGAACCAGCCCTTTTCCAAACGCGCTTTTGCTTTCTTCCAAAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCTCAAAAGTTAAAGTGCGATTTCATGGCCGGCCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTATACAGGAATTGTACCACCTCTTATTTATGCTTTGCTAGCGAGTTCAAGGGAAATAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCTTCAATGATTCAGACATTGAAAGTTCCAATTGATGGTTCTAATGGATACACTCAACTTGTTTTCACTGTGACATTTTTTGCTGGCATCTTTCAAGTTGCATTCGGCCTCTTTAGGTTTGGTTTCCTGGTGGAATATATTTCCCAATCGACGATCTTAGGGTTCTTAGCAGCAGCTGCTGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAAAAAAACTGCTTTATTTTCCGTGCTCAAATCTCTTTGGACATCCTTCAGAAACCAATCAGCGTGGCATCCCTACAACTTCGTCATTGGATTCTCATTTCTATGCTTCATCCTATTAGCCAGATTCCTGGGTAAAAGGAACAAGAAACTGATCTGGTTGTCACACGTTGCTCCTCTTCTTTCAATTATCGTATCCTCTATCATTGCGTACAAAATAAATGTCGATGAGGCTCATGTGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGGGGTAGCTTGAATCCAAGCTCATTCAATCAGTTAATATTTGATACCAAAGTTGTCGGTCATTTGATCAGAATAGGCTTGACCATTGCTATTATTTCAATCACGGGATCGATTGCTGTTGGACGATCATTTGCATCTCTAAAAGGACACAGCATTGATCCGAACAGAGAAGTGGTATCATTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTCTCACGTACTGCTGTAAACTACAATGCTGGGTCAGAAACAATGGTGTCGAACATAGTGATGGCACTGACGGTGCTGTTGTCGCTTAAATTTTTGACAGGACTTTTGTATTTCACTCCGAAAGCAATCTTAGCAGCAATAATTCTGTCGGCTGTACCAGGACTGATTGACCTAAACAAAGCGTCTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGCGTCTTGTTTGCATCTGCAGAAATAGGCCTTGCAGTTGGGATAACGGTTTCATTCGCGAAGATAATTGTAACCTCAATTCAACCTGCTATAGCGGTTATTGGAAGGATTCCAGGAACCGATTCATTCGGCGATGTTCAACAGTATCCAATGGCACTCAACACTCCCGGAGTTTTCATCGTCTCTCTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAAGAAAGGATTGAGAGATGGATGACCGATGAAAAAGCTTATAAGCATGGCAGACCAGGACAAAACACCTTCCATCACCTCATCATAGATGCCTCAAGTCTTACCAACATTGACACCACCGGAATTGCTTGTCTGGTAGAGCTCAATAAGAATATGGCTTCACGCGGAATAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAATTTCGTCAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGTGGAAGCAGTGGATGCTTGTGTTGCGACTAAAATGGTTGCTGTATGA 2016 0.4271 MCRSSSNSEMVASKKTTLEEVLDIETSMCRSQWVLNPPDPPSMPRQVLDNVKDILLPHPQPNTFSSLRNQPFSKRAFAFFQNLFPILASFQNYNAQKLKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSREIVIGPGSVDSLLLSSMIQTLKVPIDGSNGYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTILGFLAAAAVGIGLQQLKGLFGIVNFTKKTALFSVLKSLWTSFRNQSAWHPYNFVIGFSFLCFILLARFLGKRNKKLIWLSHVAPLLSIIVSSIIAYKINVDEAHVKDYRVEVLGPIKGGGSLNPSSFNQLIFDTKVVGHLIRIGLTIAIISITGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSFSRTAVNYNAGSETMVSNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKASEIWKVDKMDFLACAGAFFGVLFASAEIGLAVGITVSFAKIIVTSIQPAIAVIGRIPGTDSFGDVQQYPMALNTPGVFIVSLKSAWLCFANANLVEERIERWMTDEKAYKHGRPGQNTFHHLIIDASSLTNIDTTGIACLVELNKNMASRGIKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVVEAVDACVATKMVAV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03077 671 ProSiteProfiles STAS domain profile. 559 663 IPR002645 -
Vian2g03077 671 CDD STAS_SulP_like_sulfate_transporter 540 657 - -
Vian2g03077 671 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Vian2g03077 671 Gene3D STAS domain 519 667 IPR036513 -
Vian2g03077 671 Pfam Sulfate permease family 98 487 IPR011547 GO:0016020
Vian2g03077 671 PANTHER SULFATE TRANSPORTER 65 663 IPR001902 GO:0016020|GO:0055085
Vian2g03077 671 Pfam STAS domain 540 659 IPR002645 -
Vian2g03077 671 NCBIfam sulfate permease 85 655 IPR001902 GO:0016020|GO:0055085
Vian2g03077 671 FunFam Sulfate transporter 31 519 666 - -
Vian2g03077 671 SUPERFAMILY SpoIIaa-like 546 663 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03077 Vian-Chr2 51341440 51347976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03077 30 668 Inorganic Solute Cotransporters AT5G10180 53.438 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03077 K17469 - gmx:100817841 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03077 2 51341440 51347976 Vian2g03077 2 51341440 51347976 ECH