Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03076 ATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCATTGCTGTTATCCTCAATGATGGAGAAACTAGTAGACCCTGCTTCTGATCCAGTGGGTTATACAAAGCTAATTCTACTTGCTACTCTCTTGGCTGGCATCTTTCAGACTTCCTTCGGCCTCTTGAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTTCAATAGTTGGATTTGTGGCAGGAGCAGCCATCGTTATAGGGCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACCACCAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGCAGTTCATAATCCTTGGAATCCTCGAAATTTTATCCTTGGATGCTCGTTCTTGGTCTTCATCCTAACAACGAGATTTCTGAGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATTTCTCCTCTGGTGTCAGTTATTTTGTCGACTCTACTTGTGTTTTTGACAAAAGCTGATAAAAATGGAGTAAAAATCGTGAAACATGTCAAAGGAGGATTAAACCCAATCTCCATCCATGAGTTAGACTTCAACAGCCCCCACATTGGAGAAGTCGCGAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACCGAATCTATTGCTGTTGGGCGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTCTCACAAACATCATAGGATCTTTTACCTCTTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCGATGACGGTCTTGGTATCGTTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTATAGCTATTCTTTCTTCTGTGATCCTATCTGCTCTCCCAGGACTTATTGACGTCAATGAAGCTTATAAAATCTGGAAGGTTGATAAGATAGATTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTTCTGTTTGCTTCTGTGGAGATTGGTCTGCTAGTGGCGGTGGTTATATCTTTTTCAAAGATCATTCTCATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCTGGCACTAACTTTTTCTGCGATGTCTATCAGTATCCGATGGCAGTTAAGATTCCAGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCTCTGAGGAAGAATCAGAAGATGACAAAGGAAATTCAAGAACCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTGCTTCTCTGGAGGAACTGCACAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTTTCAAACTTTGTCTCCAAATTCGGTGGCAGAGTATTTCTCACTGTTGAAGAAGCTGTTGGCTGCAAGAGCCGCTGCTAA 1545 0.4291 MGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLLRLGFLVDFLSHASIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVMKAVWEAVHNPWNPRNFILGCSFLVFILTTRFLSKKKKKLFWLASISPLVSVILSTLLVFLTKADKNGVKIVKHVKGGLNPISIHELDFNSPHIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAMTVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDVNEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNFFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVSEEESEDDKGNSRTTIQLVILDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVSKFGGRVFLTVEEAVGCKSRC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03076 514 Gene3D STAS domain 367 513 IPR036513 -
Vian2g03076 514 CDD STAS_SulP_like_sulfate_transporter 388 502 - -
Vian2g03076 514 NCBIfam sulfate permease 1 504 IPR001902 GO:0016020|GO:0055085
Vian2g03076 514 Pfam STAS domain 388 507 IPR002645 -
Vian2g03076 514 ProSiteProfiles STAS domain profile. 407 511 IPR002645 -
Vian2g03076 514 Pfam Sulfate permease family 1 335 IPR011547 GO:0016020
Vian2g03076 514 SUPERFAMILY SpoIIaa-like 392 508 IPR036513 -
Vian2g03076 514 PANTHER SULFATE TRANSPORTER 1 509 IPR001902 GO:0016020|GO:0055085
Vian2g03076 514 FunFam Sulfate transporter 31 367 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03076 Vian-Chr2 51330851 51335044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03076 1 508 Inorganic Solute Cotransporters AT5G10180 70.530 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03076 K17469 - gmx:100817831 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03076 2 51330851 51335044 Vian2g03076 2 51330851 51335044 ECH