Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03054 ATGGCGCGACGACGCTGTTCGACTTTCCGGAAAATGTGTCTAAGTGCAAGAAAACGACAAAGAAAATGTTCAGGATGCTGGACTTGTACAACGCGATCAGTGAAAACTTCCATCTTCTCTTCTGAATCAACCTCCTTCATCATATTACAGGTGTGCGCTTCAAAGGCGAGGCTTGGTGAGGCCATCCAGACGATGTTAATCAACTTTGAATCCGCGATTCACAAGGAATCTTCAAAGATTCTAGTGCATGTAGGTGGAATCCACCCGGTCACGCGCTACATCATGAACTACATCGCGTTCCTCGCCGATTACAAGGACGCACTCGCCGAGATAGTTGTCGATTGGCCGCAAAATCCGTTGCCGGAGTCTTACTACCGCAGTTGCGATCGCGAGGGAGTGAATCGCTCGTCGGGGATAACAGAATGA 426 0.4906 MARRRCSTFRKMCLSARKRQRKCSGCWTCTTRSVKTSIFSSESTSFIILQVCASKARLGEAIQTMLINFESAIHKESSKILVHVGGIHPVTRYIMNYIAFLADYKDALAEIVVDWPQNPLPESYYRSCDREGVNRSSGITE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03054 141 Pfam Exo70 exocyst complex subunit 36 118 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian2g03054 141 SUPERFAMILY Cullin repeat-like 44 127 IPR016159 -
Vian2g03054 141 Gene3D Exocyst complex component Exo70 30 133 - -
Vian2g03054 141 PANTHER EXOCYST COMPLEX PROTEIN EXO70 37 117 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03054 Vian-Chr2 51161840 51162265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03054 37 132 EXO70 exocyst subunit family AT5G59730 49.495 4.29e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03054 K07195 - gmx:100801773 157.532