Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03048 ATGCCACTCATACTAAGGCCTCCGAGGAATACAATATGTGGAGCATGTTACGAAGGAGTGAGGAGCATAATCAACATGATGAGCAATTTCGAAACTGAGAAAGTAAAACCAGTAGTGGCCAATCCAAATCCAAACCCTTCTCCAGTTTCACGAAGAAATTCGAATTATTCTTTCTCTCTGCAGACACTCGATGATTGTATAAGATGGTGTTCAGAGCATTTAGAACAGTTTAATCAGCAGAAGGAAGACTTGGTTTTTCTGAGAGGCTTTGTTGCAGCCTTCAAAGAACAGATTCACACAGATATATTGGTCATTCCAGGCAGACACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCTGCAAGATCAGAGATATTTAAGAACATGCTAGAGTGCGATGAATGCAAAGAAGCACCGAGTAAGAGCATAACTATACCCGATGTGAAGCACGAAGAATTAGAGTGTCTTCTTGAGTTTCTGTACAGTGGAAGCTTGGGTGAGGAAAAATTGGAGAAACATGTGTACGCGCTGTCACAAGCAGCGGATAAGTACGTGATCCCACATTTGCTGAAACACTGCGAACGGTACCTGCTGAGTTCGCTAAGCACTTGTAATGCCCTTGAGACACTGGAGATTGCGGACACTTGTTCCAACCAGAAGTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGACCGTGTTGTGTCATCACCTAAATTTGAAGCTTTTGTTCACAGGAGCCCACATCTCACCGTGCAACTAGTTACAATGGCCTTTGCCAATGCTGCTAAATAA 804 0.4328 MPLILRPPRNTICGACYEGVRSIINMMSNFETEKVKPVVANPNPNPSPVSRRNSNYSFSLQTLDDCIRWCSEHLEQFNQQKEDLVFLRGFVAAFKEQIHTDILVIPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSKSITIPDVKHEELECLLEFLYSGSLGEEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTCNALETLEIADTCSNQKLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTMAFANAAK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03048 267 Gene3D - 203 267 - -
Vian2g03048 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 12 265 IPR044784 -
Vian2g03048 267 Gene3D Potassium Channel Kv1.1; Chain A 68 202 IPR011333 -
Vian2g03048 267 Pfam BTB/POZ domain 95 201 IPR000210 GO:0005515
Vian2g03048 267 SUPERFAMILY POZ domain 86 200 IPR011333 -
Vian2g03048 267 SMART BTB_4 100 202 IPR000210 GO:0005515
Vian2g03048 267 ProSiteProfiles BTB domain profile. 100 170 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vian2g03048 BTB 6.3e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03048 K10523 - gmx:100777561 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03048 2 51137307 51138331 Vian2g03048 2 51137307 51138331 ECH