Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03046 ATGTCTCCGACCGTGGGAGTCAGCGTCCCACTATTGGGCGAGTCCAACGGAGCAGTGCAGCCGGCCTCCGTCCCCGGTGCGGTGTTCAACGTGGCGACGAGCATAGTCGGCGCCGGAATCATGTCAATTCCGGCGATCATAAAGGTTCTTGGTGTGGTTCCCGCTATCGCTATGATTATTGTCGTGGCCGTGCTCGCGGAACTCTCTGTCGAGTTCCTCATGCGCTTCACGCACTCCGGCGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGGTCGCCGGGAGCGTTGGTCGCGCAAGCTTGCGTCATCATCACCAACGTCGGGGGCTTAATTCTTTACCTGATCATCATCGGGGATGTGCTATCTGGAAAGCAAGATGGAGGTGAAGTGCATTTGGGTATTCTGCAACAGTGGTTTGGTATTCATTGGTGGAATTCCAGGGAATTTGCTCTTCTCTTCACTTTGGTCTTCGTCATGTTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATTTTTGCACTGGTGCAAGGAAAAACGCAGACTCCTAGATTGTTTCCTGGGTTGGACAACCAAACCTCATTCTTTGATCTATTTACTGCAGTTCCCGTTGTTGTCACAGCTTTCACATTTCATTTTAACGTGCATCCAATTGGGTTTGAGTTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTACTGTGATCTACATTACAGTAGGCCTATTTGGGTACCTATTATTTGGGGATTCAACACAATCAGACATTCTCATCAATTTTGACCAGACTAATGATTCTGTGGTTGGTTCCTTGTTCAATACTTTGATCCGTGTAAGCTATGCGCTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCATTGAGATCCAACATAGATGAAGTTCTCTTCCCCAATAAGCCTATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACTGTGGTGCTGCTTGTATTCTCCTACCTCGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTTGGATCAACATCGGCAGTGTGCCTTGCCTTCATTTTCCCTGGCTGTATTGTTTTAAGGGATGCATGTGGTATAGCAACGAAAAGGGATAAAATTATTGCACTGATAATGATTATACTGGCCGTGGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1311 0.4645 MSPTVGVSVPLLGESNGAVQPASVPGAVFNVATSIVGAGIMSIPAIIKVLGVVPAIAMIIVVAVLAELSVEFLMRFTHSGETTTYAGVMREAFGSPGALVAQACVIITNVGGLILYLIIIGDVLSGKQDGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMFPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIFALVQGKTQTPRLFPGLDNQTSFFDLFTAVPVVVTAFTFHFNVHPIGFEFAKPSQMTTAVRLALLLCTVIYITVGLFGYLLFGDSTQSDILINFDQTNDSVVGSLFNTLIRVSYALHIMLVFPLLNFSLRSNIDEVLFPNKPMLATDNKRFMILTVVLLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGCIVLRDACGIATKRDKIIALIMIILAVVTSVLAISTNIYNAFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03046 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Vian2g03046 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03046 Vian-Chr2 51122586 51124823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03046 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.005 2.48e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03046 - - gmx:100815694 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03046 2 51122586 51124823 Vian2g03046 2 51122586 51124823 ECH
Vian2g03046 2 51122586 51124823 Vian7g01516 7 23964380 23967086 PCT
Vian7g01515 7 23960628 23962759 Vian2g03046 2 51122586 51124823 PCT