Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03042 ATGTTGTTTGGCCCTTCAGCTTTAGGGCACATAAAGGTTGTACACAAAACCTTGTTCCCGGTAAAGGGTAGTCTTGTGCTTAAAACACTTTCATATTTTGGCCTCATGTTCTACTACTTCTTATGGAGTGTTAGATTAGATCTTTACACGGTGTTGAAGACAGAAAAGGTAGCTGTGGTTCTTGCTATATCTGTATCCATATTTACATTTCTTATCCCTACTGGACTCTCGCTCCTGTTGAAGACCTATGTTGCAATGGAAAAAGAAGTTGCAGACTCACTTCCATATATCGGTATCTCACAGACCTATACTATATTCATTAGCATAGCAGTGCTCTTGACGGATCTCAAAGTCCTTAATACTGACATAGGACGATTAACCATATCAGTAGCAATTCTTACTGATATGACTGGCATGGTTTTGTCAATGTTTACTTTTGCAGTAATTCAGTATACGGACGGTGATATTCTCATACTAGTATTTGCTGCTCTATCCTCATTTGTATTCCTGCTTCTTATTGTATTTATGATGAGGCCAATGATACTTTGGATGGTAAAGAACCCAGGAAAAGGTTCGACTAATGAAATTTGCACTGTCTGTATCTTTGTCTTCGTTATCCTTTCTGGACTTGTCAGTGAACTAATCGGACAGCATTTTTCCATGGGACCGATAATTTTAGGTCTGTCTCTTCCAGAAGGGCCACCCATAGGAACATCTTTGATGAAAAAACTTGAGATAATGTGTGTGGATTTTCTTTATCCAATCAGCCTAGCTGTTAACGGATTGGTGGTTGATATATTCAATATAAACATTAATTCTCTATGGATTATATGCCTCGTTATAGTTGTGGGTTTCTTTGTAAAGATTGGTGCTGTCATGTTGCCAGGATACTATTTGAATATATCCATGAAAAAATGTTGGATCATTGGTCTCCTTCTAAATGGAAGGGGTATATGTGAGCTTGTCCTCTTCAATCTGTGGTTGGAAAGTCAGATAATAAATGAAGACGAGTTCTCTGTGATGGTTATCTCTGTTATAGTAATAAATGTTATCTTAGTAACAGTCGTAAAATTCATGTACGACCCTTCAAAACCATATGATAATGTAAGCAGATGTACAATTCAACATAGTACAAGAGATTCTGAGCTCCGAATTATGGTGTGCATTGACGACAAGGAAACACTCCCTACAATCCTGAACCTGTTAGAAGCCTCCTATGCTACTAGAGAAAGCACGATTGAGGTTACAGCGTTAGTCCTAGTTGAGCTTCAAGGAAGAGCCAGACCTGTTCTTCTTTCTAACCAATCCCATGAGAATGACGTTGAGACACTGGCTTATGGCGCTAGAATGGCTAGGCAAGAGTATGTGTGGGTAACTGTGGTTAGGTTCCTTCTATTTGGTGAGGAAAATTCTAAGGACAGAAAACGTGACAGTGATCTTATAGATGAATATAGATACCACAATGCTGGAAATAATAGGTTTGAGATTTTGGATGAAGTTGTGAAAGATGGGATAGATATGTCTATATGCATAAGAAGATTGGTGGATTATTTTGATCTTGTGATGGTGGGGAGGCGACATTCACAATATGCTATTCTTCAAGGACATGATAATTGGAGTGAGTGTGAAGAGTTAGGGGTTATTGGGGACATGCTAGCATCACCAAATTTTGTCACCAAGGCATCGGTGTTGGTCATACAACAACAGAGAATAAGAGGGAGAGTTATCAAACCTACTGTCAATTTGAATCAGATGTCAAAAGATCAACTCATGCATAGTGTTCCAACTAACGACTCGTTAAGTCCTTCATGTACTATTTTTGTCGACAAGAATGACAAAATGTAA 1845 0.3848 MLFGPSALGHIKVVHKTLFPVKGSLVLKTLSYFGLMFYYFLWSVRLDLYTVLKTEKVAVVLAISVSIFTFLIPTGLSLLLKTYVAMEKEVADSLPYIGISQTYTIFISIAVLLTDLKVLNTDIGRLTISVAILTDMTGMVLSMFTFAVIQYTDGDILILVFAALSSFVFLLLIVFMMRPMILWMVKNPGKGSTNEICTVCIFVFVILSGLVSELIGQHFSMGPIILGLSLPEGPPIGTSLMKKLEIMCVDFLYPISLAVNGLVVDIFNININSLWIICLVIVVGFFVKIGAVMLPGYYLNISMKKCWIIGLLLNGRGICELVLFNLWLESQIINEDEFSVMVISVIVINVILVTVVKFMYDPSKPYDNVSRCTIQHSTRDSELRIMVCIDDKETLPTILNLLEASYATRESTIEVTALVLVELQGRARPVLLSNQSHENDVETLAYGARMARQEYVWVTVVRFLLFGEENSKDRKRDSDLIDEYRYHNAGNNRFEILDEVVKDGIDMSICIRRLVDYFDLVMVGRRHSQYAILQGHDNWSECEELGVIGDMLASPNFVTKASVLVIQQQRIRGRVIKPTVNLNQMSKDQLMHSVPTNDSLSPSCTIFVDKNDKM 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03042 614 PANTHER CATION/H + ANTIPORTER 2 437 - -
Vian2g03042 614 Pfam Sodium/hydrogen exchanger family 1 354 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian2g03042 614 Gene3D - 1 364 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03042 Vian-Chr2 51081040 51083389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03042 439 568 Antiporter Super Family AT2G13620 33.775 1.23e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03042 K26731 - gmx:100811954 540.421