Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03025 ATGAACAAAAACTGGAAATCCAGCTGCTTCAGGGATCCTGTGTTCCTTCTAGCGTTGTGTTTGTTCTTTCAGAACTTTAGTTCCTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAGGGAATAGTAAGAGACCCTTTTGGTGCTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTTAACCATTGTAATTGGTTTGGAGTTGAGTGCTCTGCTGGAAGAGTGGTAGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAAATCTGGTACCTGAGCTCGCGAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACACTTGGATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACATCTACCTACAGATCTTGGGAATAATATTTCGCTAACAATCCTTTTGTTGGACAACAATGAACATCTCTGTGGTTTCTCTCCTGAAATTAATAAATTGATGTTGATTTCTGAATATCAAGTAGACGAAAGACAACTGAGTCTGGCAGCAAAAGTGCCAGCTTGTACAAGAAGATTCATCAAACGGCACATTGGCAAAAATAAGAAAGGTTTAAGGAGGCTACTGCAATCTTCTCGTGATAGCAATTCTTTTAACCGTGCTGCTTGGTTTCCTGATAGTCCTCCTCCATCTTCTTCAGCTCCCTCACCGGCCCCAGCAACACCGCCACCGGTTGAGGAACCAACTTTCACTGACCGAAATGATTCTGCTTCTCCTTCTCCTTCTCTGCCTGAACCGCGCTCTGAACCACCATCTACAAGTGGCTCATCAGATAGCAGTGGCTCATCAGATAGCAATGTTGTTGCTATTTTGGCTGGAGTTATAGGTGGTGTTGTATTTCTTGTCATTTCAATCATTGGCATATATCTCTGCAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCGACAGGATTAAGTGGACAGCTTCAGAAGGCATTCATAACAGGTGTGCCAAAGCTGAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCTTCCATTGGTACAGTGTACAAAGGGACTTTGTCCACTGGTGTTGAAATAGCCGTGGCCTCTGTTGCAGCGACATCATCAAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTGCACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTCAGAGTTGCCATGGGTATGGCTTACTGCCTACAACATGTGCACCAGTTGGAGCCTCCTTTGGTTATTGGCAACCTGAATTCTTCAGCGGTTCAACTCACGGATGATTGTGCTGCCAAAATCTCTGATTTGAGTTTCTTAACTGAAATAGCTTCAGCTGTGATGAAATCTTCTGCTAGACAACACCCTGACATGACCCCAGCAAGTAACATTTACAGTTTTGGTGTTATATTATTTGAAATGGTGTCAGGCAGGCTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACAATATTTACATGGGGATCAGCCCCTCAAAGAAATGGTGGATCCATCTCTGGCGTCCTTCCAACAAGAACAGCTGGAACAAGTTGATGCTTTGATCAAATCTTGTGTCCACCCTGATCCAAAGCAAAGACCAACTATGAAAGAAATTTGTGTGAGATTAAGAGAGATAACAAAAATAACTCCCGAGGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCGGAGCTTGAGATTGCCTCGGTAAATGGAAACTGA 1941 0.424 MNKNWKSSCFRDPVFLLALCLFFQNFSSCCSLNEEGKALLKFKQGIVRDPFGALSNWVNDEVAVNHCNWFGVECSAGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLDELEVLDLGYNNFSGHLPTDLGNNISLTILLLDNNEHLCGFSPEINKLMLISEYQVDERQLSLAAKVPACTRRFIKRHIGKNKKGLRRLLQSSRDSNSFNRAAWFPDSPPPSSSAPSPAPATPPPVEEPTFTDRNDSASPSPSLPEPRSEPPSTSGSSDSSGSSDSNVVAILAGVIGGVVFLVISIIGIYLCKTNKVATVKPWATGLSGQLQKAFITGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSTGVEIAVASVAATSSKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHVHQLEPPLVIGNLNSSAVQLTDDCAAKISDLSFLTEIASAVMKSSARQHPDMTPASNIYSFGVILFEMVSGRLPYSVDNDGSLDDWASQYLHGDQPLKEMVDPSLASFQQEQLEQVDALIKSCVHPDPKQRPTMKEICVRLREITKITPEAAVPKLSPLWWAELEIASVNGN 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03025 646 MobiDBLite consensus disorder prediction 233 251 - -
Vian2g03025 646 PANTHER PROTEIN MALE DISCOVERER 2 13 643 - -
Vian2g03025 646 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Vian2g03025 646 Gene3D Transferase(Phosphotransferase) domain 1 439 627 - -
Vian2g03025 646 MobiDBLite consensus disorder prediction 224 287 - -
Vian2g03025 646 ProSiteProfiles Protein kinase domain profile. 356 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g03025 646 FunFam Inactive receptor-like serine/threonine-protein kinase 330 438 - -
Vian2g03025 646 Gene3D Ribonuclease Inhibitor 30 220 IPR032675 -
Vian2g03025 646 FunFam Nuclear pore complex protein NUP107 32 192 - -
Vian2g03025 646 SUPERFAMILY L domain-like 32 166 - -
Vian2g03025 646 SUPERFAMILY Protein kinase-like (PK-like) 339 615 IPR011009 -
Vian2g03025 646 Pfam Protein tyrosine and serine/threonine kinase 358 614 IPR001245 GO:0004672|GO:0006468
Vian2g03025 646 Gene3D Phosphorylase Kinase; domain 1 328 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03025 Vian-Chr2 50915430 50919205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03025 9 617 Receptor kinase-like Gene Family AT5G16000 25.118 6.79e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vian2g03025 PK_Tyr_Ser-Thr 1.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03025 - - gmx:100784541 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03025 2 50915430 50919205 Vian7g01544 7 24265021 24268344 PCT