Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03020 ATGGTGCGTGTCAAAGAAGCTCATGTTGTCACACCGTCAGACCCCACACCCGACACTGTCCTTGCACTCTCGGCACTCGACTCCCAACTCTTCTTGCGCTTCACAATCGAGTATCTCCTTGTTTACAGGCCCGGCCCGGGCCTCGACCGCCCTTCAACCGCCACTCGTTTAAAAACCGCATTAGCTAAAGCCCTTGTTCCTTATTATCCATTTGCTGGAAGAGTCCGGCCCCATCCCCAGGGGCTGGGCCTCGAGGTCGTTTGTCGGGCCCAGGGCGCTGTCTTCATCGAAGCCTCTTCCGAACGCTACAGTGTCAATGATTTCCAAAAGGCCCCCAAAACAGTGGCCCAATGGAGAAAGCTCTTATCCCTCTACGTCACTGACGTCCTCAAAGGCTCGCCTATTCTCGTCGTCCAGCTCACCTGGCTCGCCGACGGAGGCGCCGCCGTCGGCGTCGGAATCAACCACTGCATCTGCGACGGCATCGGCAGCGCTGAGTTTCTGAATTATTTCTCCGATTTAGCCTCGGAGAAATGTCAGGGTCTGGGTCTCGGTGTGAGTGTGGATCCGAAGCCGAAACCGGTTTGGGATAGACATCTTCTGAATCCGGATAAGCGAGGCGAGGCGAATCCAGCGATGCATGCTGAGTTTTGTGGAGTTCCTGATTTGTGCGGGTTTATGAACCGTGTGACGAGCAGGCTGAAACCTACTTGCATTGTGTTGGACGAGAGACGCATCGAGGCGCTGAAGCGCGCGTGCGGAGGAGAGTCGTGCACGTCCTTCGAGGTAGTGGCCGCGCACGTGTGGAGGAGCTGGGCTCGGGCGTTAGGGTTTCCGAAGAACCAGACGCTGAAGCTTTTGTTCAGCGTGAACGTGCGGAAGCGCGTGAAGCCGGGTTTGCCGGAGGGGTACTATGGGAACGCGTTTGTGTTGGGGTGCGCGCAGAGCAGCGCGTGGGAGTTGGGGGAGAGAGGGGTGGCTCACGTGTGGAGTGCGGTGAAGCGTGCGAAAGAGAGGGTGGATAGCGAGCACGTGCGGAGGGTCGTTGAGTTGGTTTCCGAGTCAAGGGCGAGTCCTGACTCGGTGGGGGTGCTGATTCTGTCGCAGTGGTCGAGACTGGGTTTGGAGAGGGTTGAACTAGGAATGGGAAAGCCTCTGCATGTGGGACCCATTTGCTGCGATAGGTACTGTTTGTTTCTTCCGGTTACCGGTGAACGCCACAGCGTGAAGGTGATGGTGGCCGTCCCCAGCGCCGCCGTTGGCAATTTCCATCGCTTCCTCCGGGAATCCAATTCATGA 1299 0.5774 MVRVKEAHVVTPSDPTPDTVLALSALDSQLFLRFTIEYLLVYRPGPGLDRPSTATRLKTALAKALVPYYPFAGRVRPHPQGLGLEVVCRAQGAVFIEASSERYSVNDFQKAPKTVAQWRKLLSLYVTDVLKGSPILVVQLTWLADGGAAVGVGINHCICDGIGSAEFLNYFSDLASEKCQGLGLGVSVDPKPKPVWDRHLLNPDKRGEANPAMHAEFCGVPDLCGFMNRVTSRLKPTCIVLDERRIEALKRACGGESCTSFEVVAAHVWRSWARALGFPKNQTLKLLFSVNVRKRVKPGLPEGYYGNAFVLGCAQSSAWELGERGVAHVWSAVKRAKERVDSEHVRRVVELVSESRASPDSVGVLILSQWSRLGLERVELGMGKPLHVGPICCDRYCLFLPVTGERHSVKVMVAVPSAAVGNFHRFLRESNS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03020 432 Pfam Transferase family 1 423 - -
Vian2g03020 432 Gene3D - 1 217 IPR023213 -
Vian2g03020 432 Gene3D - 228 429 IPR023213 -
Vian2g03020 432 PANTHER ACYL TRANSFERASE 4 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03020 Vian-Chr2 50879714 50881012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03020 2 429 Monolignol Biosynthesis Gene Families AT5G48930 28.062 1.45e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03020 - - pvu:PHAVU_001G244800g 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03020 2 50879714 50881012 Vian7g01548 7 24298153 24299472 PCT