Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03018 ATGGCCAGCCCAGATACCCGACCATTCACTTGGCACTACACAGAAATCGATGACAGAGACCTAGAGATCCGAGGAAGGACTTTGTTCTTCGTCATCGTACTCTTCTCCATTATCCTTCTCGTCACGGTTCTCTTCATATACACGCGCTGGGTTTGTCGCTACCAGGGGCTCCTTCCCACCACAGCGTTTTCCGCCGCTACCCACGCGCCGTCACTCCCGCAGTCTCAGGGACTGGACCCCGCAACCCTCAAGAAACTGCCCATAATCCTTCACCACGCGCCCTCGGATCGCGACGAAAGCTCGTGGGACGAAACGGAGTGTTGCATCTGCCTCGGCGAGTTCAGAGACGGCGAGAAAGTGAAGGGTTTAACTTCTGAGTCTCCCTTTCGATTTTTGTTCACCATGAGAGCCAAGCTAACGTAG 423 0.5461 MASPDTRPFTWHYTEIDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGLLPTTAFSAATHAPSLPQSQGLDPATLKKLPIILHHAPSDRDESSWDETECCICLGEFRDGEKVKGLTSESPFRFLFTMRAKLT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03018 140 PANTHER RING FINGER DOMAIN-CONTAINING 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03018 Vian-Chr2 50853605 50859601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03018 11 123 C3H Transcription Factor Family AT3G11110 36.207 3.20e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03018 - - gmx:100803278 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03018 2 50853605 50859601 Vian7g01550 7 24330240 24330746 PCT