Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02984 ATGGCGGTGAAACTGACAAAAGCGCAGAAGAAGATAGCCTACGATGCCAAACTGTGTCGGCTTCTGGATAACTACACCCAAATTCTGGTGGTGGCTGCGGACAACGTTGGATCCAACCAGCTTCAGAACATCCGACAGGGTCTACGTGGCGACTCCGTGGTGCTCATGGGAAAGAACACCATGATGAAACGCTCTGTCAAACTCCACGCTGAGAGCACCGGCAACAAGGCCTTCCTCAACCTTGTGCCTCTTCTAGTGGTGGGAGCTCCTGCTCGTGTTGGGTTGATTGCACCTATTGATGTTGTAGTTCCTCCGGGCAACACAGGGTTGGATCCCTCTCAGACTTCCTTTTTCCAGGTACTGAATATTCCTACAAAAATTAACAAGGGTACTGTGGAAATTATCACTCCTGTGGAACTGATTAGGAAGGGTGAGAAGGTTGGGTCTTCTGAAGCTGCATTGCTTTCGAAGCTTGCGATAAGGCCATTCTCGTATGGGCTTGTTGTGGTTTCTGTTTATGACAACGGTTCGGTGTTTAGTCCTGCGGTTCTTGACCTCACTGACGATGACCTCCTTAATATGTTTGCTGATGGTGTTTCCATGCTATCTTCACTGTCGTTGGCTATCTCCTACCCTACAATTGCAGCTGCACCACACATGTTCGTTAATTCCTATAAGAACGTCCTCGCTGTTGCAGTGGCCACAGAATATTCGTTCCCCCAGGCTAACGAGGTGAAGGAGTACCTGAAGGATCCTAGTAAATTTGCAGTAGCTGCTGCTGTTGCCGCACCTGCTACTGGTTCTGCTCCAGCTGCTGCCTCCAAGGAGGAGGAAAAGAAGGAAGAACCAGAAGAATCTGATGACGACATGGGCTTCAGTTTGTTTGATTAA 891 0.4893 MAVKLTKAQKKIAYDAKLCRLLDNYTQILVVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRSVKLHAESTGNKAFLNLVPLLVVGAPARVGLIAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLSKLAIRPFSYGLVVVSVYDNGSVFSPAVLDLTDDDLLNMFADGVSMLSSLSLAISYPTIAAAPHMFVNSYKNVLAVAVATEYSFPQANEVKEYLKDPSKFAVAAAVAAPATGSAPAAASKEEEKKEEPEESDDDMGFSLFD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02984 296 Gene3D - 5 88 IPR043141 -
Vian2g02984 296 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 86 - -
Vian2g02984 296 CDD Ribosomal_P0_L10e 9 162 - -
Vian2g02984 296 Gene3D - 89 164 IPR043164 -
Vian2g02984 296 PIRSF L10E 1 88 IPR030670 GO:0042254
Vian2g02984 296 PIRSF L10E 81 296 IPR030670 GO:0042254
Vian2g02984 296 Pfam 60s Acidic ribosomal protein 211 295 - -
Vian2g02984 296 MobiDBLite consensus disorder prediction 265 296 - -
Vian2g02984 296 Pfam Insertion domain in 60S ribosomal protein L10P 91 160 IPR040637 -
Vian2g02984 296 Pfam Ribosomal protein L10 8 72 IPR001790 -
Vian2g02984 296 SUPERFAMILY Ribosomal protein L10-like 8 75 IPR043141 -
Vian2g02984 296 MobiDBLite consensus disorder prediction 281 296 - -
Vian2g02984 296 FunFam 60S acidic ribosomal protein P0 90 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02984 Vian-Chr2 50484052 50486032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02984 1 295 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 72.642 6.94e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02984 K02941 - zju:107413777 453.751