Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02977 ATGGCTGTGATATCAAAATGCACTGTTGTGCCTCACCAAAACTCCACTCTCGGAGACCTAAAGCTCTCCATCTCAGACCTTAACATGTTTTTGGCTCACTACATCCAAAAGGGCTGTCTCTTCACCACCCCATCTCACCCCTCTCACACTCTCATCCCTCACCTCACCAACGCGCTTTCTCGCACGCTCTCAATTTTTCCTCCTTTAGCTGGCCGATTCAAAACCAATGCCCACGGCCACGTCTATATCGCATGCAACGACGCTGGCGTTGACTTCATCCACGCCACCGCCACCAATCTCTCTGTCACCGACCTCCTGTCGCCGTCCGATGTCCACTCGGCCTTTAAGAAATTCTTCCCTTTCCACCACAAACTCAGTTACACCGCCCATTCCTCCCCCATCATGGCCATTCAGGTCACTGAACTCGCAGACGGTATTTTCATCGGTTGCGCCGTCTGCCATGCTGTTACCGACGGCTCCTCCTTTTGGAACTTCTTCAACACCTTTTCTGCGGTTTCTCGAGGACTCATATGTCCCTCTAGGCTCCCGGATTTTCACCGGGAATCAATCCTCATGTCGAAAGTCGTTCTTCGATTGCCCCAAGCACGTGTTAACCGTGAATCGATCCAGAAGTTGAAAGGCTCGGTGAACAACAGTAGGAAAATATTTGGAGCAGAGAAGGAGGAGGTGGACGTTGAGTTAATGGCGAAGCTGAGCAATGACACAGCATTGAAAAAGGTCGCAGTGGGCGAAACGACAGAGATCTCTTCGTTTCAGGCCTTATGCGCACTGATGTGGCGTTGCGTGACTAGAGCAAGGAATTTGGAGAAGGGTAAAACGACGACGCTCCGAATGGCAGTTAATGTTCGGCAACGTTCGGAGCCTAAGTTGGGGGATTGTTACTTCGGGAATGCGATTCAAAGCATCGTGACGCATGCAGTAGTTGGTGACGTGGTGTCCATGGACCTTGGCTGGTGTGCGGAACAGGTGCACAAGAGCGTGACGGCGTTCAGTAGTGATACGGTGCGTCGTAACGTGGAGAATTGGGAGCGTGAGCCGAAGTGCTTCGAGTTAGGGAACCATGACGGACCACATGTTTGA 1101 0.5177 MAVISKCTVVPHQNSTLGDLKLSISDLNMFLAHYIQKGCLFTTPSHPSHTLIPHLTNALSRTLSIFPPLAGRFKTNAHGHVYIACNDAGVDFIHATATNLSVTDLLSPSDVHSAFKKFFPFHHKLSYTAHSSPIMAIQVTELADGIFIGCAVCHAVTDGSSFWNFFNTFSAVSRGLICPSRLPDFHRESILMSKVVLRLPQARVNRESIQKLKGSVNNSRKIFGAEKEEVDVELMAKLSNDTALKKVAVGETTEISSFQALCALMWRCVTRARNLEKGKTTTLRMAVNVRQRSEPKLGDCYFGNAIQSIVTHAVVGDVVSMDLGWCAEQVHKSVTAFSSDTVRRNVENWEREPKCFELGNHDGPHV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02977 366 Gene3D - 202 366 IPR023213 -
Vian2g02977 366 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 358 - -
Vian2g02977 366 Pfam Transferase family 3 364 - -
Vian2g02977 366 Gene3D - 1 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02977 Vian-Chr2 50437751 50439688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02977 25 358 Monolignol Biosynthesis Gene Families AT5G48930 28.035 7.49e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02977 - - vum:124828482 527.709