Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02976 ATGATCTCAAAATGCAAAGTCGTTCCTCAGAAGAACTCTACTACGGGAGATCTGAAACTCTCAATCTCAGACCTTAACATGCTCTTATGTCACTACATCCAAAAGGGCTGTCTCTTCACGACCCCATCTCTACCGTCACAAGCTCTCATCCCTCATCTCACCAAAGCACTATCTCATACCCTCTCGCTTTTTCCTCCCTTTGCAGCAATTTCTCGAGGAGAAACCGCTTGTCTCTCCAGCCTCCCGGATTTTCGTCGGGATTCCATCCTCACCTCCAAGGTCGTGCTTCAACTTCCGAAAGAAATAAAGGCCACCTTCAACGTTGAGGCACCATTTCGCGAGAGAATCTTCAGTTTCAGCCGTGAATCAATTCAGAAGCTGAAAGCCTTAGTGAACAAACGTCCGATCATGTTCACGCCAGAGAACATTGATGTCGCGGATGAGACGATGGCGAAGCTGAACACTGACACACAACTGAAAACAGCTACAGAAGGCGTAAGGGGTGAAACAACAGAGATTTCTTCATTCCAATCGTTGTGCGCACTGATGTGGAAGTGCGTGACTAGGGCGAGGAATATGGAGAAGACTAAAGTGACGTCGTTTCGAACTGCCGCTAATATTCGGCAACGCATGAAGCCCAAATTGGGGGATTGTTACTTCGGGAATGCGCTTCAGAGCATTACCACGTGTGCAACAGTGGGTGATGTGGTTATCAAGGACCTTCAATGGTGCGCAGAGCAACTGAATCGGAGCGTGAAGGCGTTTGATAGCGCCACGGTGCAGCGTAATGTGGAGAACTGGGAGCGTGAGCCAAAGTGCTACGAGTTAGGCAACCATGACGGCGCCACTGTGCAGATGGGAAGCTCGCCAAGATTTCCGATGTATGACAACGATTTTGGATGGGGGAGGCCCATAACGGTTCGGAGCGGCGGAGCAAACAAGTTTGACGGTAAAATGTCGGCTTTTCCTGGAAGAAATGGCGATGGCAGCGTCGATGTGGAGGTGGTTTTGGCGCCTGAAACAATGGCGCAACTCGAGTCCGATCCCGAATTCATGCTTTACGTGTCTGCCCAATGCGTAGAGACACGTGTTTGA 1095 0.4995 MISKCKVVPQKNSTTGDLKLSISDLNMLLCHYIQKGCLFTTPSLPSQALIPHLTKALSHTLSLFPPFAAISRGETACLSSLPDFRRDSILTSKVVLQLPKEIKATFNVEAPFRERIFSFSRESIQKLKALVNKRPIMFTPENIDVADETMAKLNTDTQLKTATEGVRGETTEISSFQSLCALMWKCVTRARNMEKTKVTSFRTAANIRQRMKPKLGDCYFGNALQSITTCATVGDVVIKDLQWCAEQLNRSVKAFDSATVQRNVENWEREPKCYELGNHDGATVQMGSSPRFPMYDNDFGWGRPITVRSGGANKFDGKMSAFPGRNGDGSVDVEVVLAPETMAQLESDPEFMLYVSAQCVETRV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02976 364 Gene3D - 99 347 IPR023213 -
Vian2g02976 364 Gene3D - 1 76 IPR023213 -
Vian2g02976 364 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 69 - -
Vian2g02976 364 Pfam Transferase family 67 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02976 Vian-Chr2 50432739 50434353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02976 140 346 Monolignol Biosynthesis Gene Families AT5G48930 31.132 8.51e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02976 - - vum:124828482 590.112