Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02965 ATGGAAAATGCAATTTCATCCAGCTTGGCAAGAACGAAATCGGAGGATATGGAGGAGACGGGGGCAACGACAAGTATGAAATCGCCCCCGTCAGCGGAGGGTGGCGGAGTGCTGTCGAGGAAATCGAGCAAGAGGATGACAGCGGCCTCGCCGAGTGGGGGCGGAGGAAGAAGCACACACATAAGGAGGGCGAGGAGCGCTCAGTTGAAGGTGGATGTGGATGAGGTTGGCAGCGGCGTGGCTCTGAGTCGAGCTTCTAGCGCTAGCTTGGGCCTCTCGTTCTCCTTCACCGGCTTCACTCTCCCTCCCGATGAAATCGCCGATTCAAAACCTTTCAGCGACGAAGATATCCCGGAGGATATTGAAGCCGGAACTCATAAGCCTAAGTTCCAGACAGAACATACTCTGCCAATATATCTGAAGTTCACCGACGTGACCTACAAGGTAGTGATTAAAGGCATAACTACAACTAAGGAAAATGATATCTTGAAGGGGATCACTGGTTCTGTAAATCCTGGGGAAGTTTTGGCATTAATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAGTCCACAATAGGTGGCTCTATCACTTACAATGACCAACCTTATTCCAAGTTTCTAAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCTCACCTTACTGTTAGAGAAACATTGACGTATGCTGCTCGCTTAAGATTGCCAAATATACTAACGAAAGAGCAAAAGGAAAAACGAGCTTTGGATGTCATCGAAGAGCTGGGATTAGAGAGGTGCCAAGATACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGCAGTGAGATCATAATCAACCCTTCTCTTCTATTTCTTGACGAACCAACTTCTGGTTTGGATTCTACGACAGCTTTAAGGATAGTTCAATTGCTACATGACATAGCAGAGGCAGGAAAAACCGTAGTGATAACAATCCATCAACCATCTAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTTCAGTTTATAGGGTGTGCACCCCTTATTACCATGAACCCAGCTGAGTTTTTATTAGACCTTGCAAATGGAAACGTGAATGATATTTCTGTACCATCAGAGTTAAAGGATAGAGTGCAGGTAGGAAATGCTGAAGTTGAAACATGCAATGACAAACCATCTGCTTCAGTTGTACAAGAGTATCTGGAAGAGGCATATGATTCTCGAGTGGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCTCTCGATGAAGAACTGAAGTCTAAAATCTATTCTTCTAAAAGACAGTGGGGGGCAAGTTGGTTTGAGCAATTTTCTATACTGTTTTCAAGAGGATTCAAAGAGAGGAAGCATGACTATTTTAGCTGGTTGAGAATTACCCAAGTTCTTTCCACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAACCCAAAAGGTTTGCAAGATCAGGCAGGACTTCTCTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCTGTCTTTACTGCCATATTCACATTTCCTCAAGAGAGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGTGCATATTTTGTGGCTAGAACTACAAGTGACCTTCTACTAGACCTGGTGTTACCAGTCTTTTTCCTCCTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGGCGTTTTTTTCTTAGTATTCTTACGGTTTTTCTCTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATCGGGGCTACACTAATGGATTTGAAACGGGCAACAACTTTGGCTTCAGTAACCGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCCATATTCATATCTTGGATTCGCTACCTCTCCTTCAACTACCATACGTATAAACTTCTGCTTAAGGTTCAATATGAACACATTACACGGACCATAAATGGAATCACACTTGACAGTGGATTCACAGAGGTTGCCGCTCTGTTAGCCATGGTTTTTGGTTACCGTCTTTTGGCATATCTCTCCTTGCGGCGGATGAAACTTCAAGCTGGAAATTAA 2211 0.4378 MENAISSSLARTKSEDMEETGATTSMKSPPSAEGGGVLSRKSSKRMTAASPSGGGGRSTHIRRARSAQLKVDVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDEDIPEDIEAGTHKPKFQTEHTLPIYLKFTDVTYKVVIKGITTTKENDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVRETLTYAARLRLPNILTKEQKEKRALDVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQLLHDIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLITMNPAEFLLDLANGNVNDISVPSELKDRVQVGNAEVETCNDKPSASVVQEYLEEAYDSRVAEIEKTKLMVPVPLDEELKSKIYSSKRQWGASWFEQFSILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVFFLLVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYEHITRTINGITLDSGFTEVAALLAMVFGYRLLAYLSLRRMKLQAGN 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02965 736 Pfam ABC-2 type transporter 481 690 IPR013525 GO:0016020|GO:0140359
Vian2g02965 736 CDD ABCG_EPDR 137 368 - -
Vian2g02965 736 Gene3D - 139 380 IPR027417 -
Vian2g02965 736 FunFam ABC transporter G family member 22 150 380 - -
Vian2g02965 736 SMART AAA_5 172 363 IPR003593 GO:0016887
Vian2g02965 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 380 IPR027417 -
Vian2g02965 736 MobiDBLite consensus disorder prediction 1 66 - -
Vian2g02965 736 Pfam ABC transporter 163 314 IPR003439 GO:0005524
Vian2g02965 736 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524|GO:0016887
Vian2g02965 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 386 IPR003439 GO:0005524
Vian2g02965 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 119 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02965 Vian-Chr2 50321101 50328389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02965 126 415 Calmodulin-binding Proteins AT2G36910 26.667 1.43e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02965 K05681 - gmx:100796008 1281.16