Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02959 ATGGGTTCTCTCCCACACGTAGTAGAGGACTGTTTGGGGTTTCTGCAACTCTTTAGCGACGGTTCTATTTTCCGTTCAAACGATATAGAGTTCAAAATATCAGCAGTTCAAGATCATTCCGTAACCTTCAAGGACTATCTCTTCCACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAACCCCAACACATGACGCTCCACACCAAGAAGCTTCCTATTGTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCACGCGCCTCGCCGCTGGGCTCCAGGCGGTCGTCCTCTCGCCGGACTACCGCCTCGCACCGGAACACCGCCTTCCGTCGGCTGTGGACGACGCGGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGACTGAGACTGAAGGAAGATGAAAACGGTGGGGACGCCTGGCTGAGTGCTGACGTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCCTCTGGCGGGAACATTGCCCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGTGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGAACCAAGTCCGAGGAAGGTCCACCAGAGCACATGCTTAACCTCGAGTTATTGGACAGATTTTGGAGGTTGTCGATGCCTTTGGGAGAATCGAGAGACCATCCATTGACGAATCCGTTTGGAGCTGGAAGCCCTAATCTTGAAAAAGTGAAGCTTGATCCTATTTTGGTGATAGTTGGTGGCAATGAATTGCTTAAGGATAGAGCAGAAGACTATGCTCGAAGGTTAAAAGAACAAGGCAAAGACATTGAATACCTTGAGTTTGAGGGTTGCGAGCATGGGTTTTTCACTCATGATTCATACTCACAACTTGGAGAAGAGGTCATCCAAATCCTTAAACAATTCATGCTTCGGACTTCTGCTTGA 984 0.5132 MGSLPHVVEDCLGFLQLFSDGSIFRSNDIEFKISAVQDHSVTFKDYLFHKRFNLSLRFYKPQHMTLHTKKLPIVIFLHGGGFCFGSRTWPHIHNCCTRLAAGLQAVVLSPDYRLAPEHRLPSAVDDAVEAVRWLQRQGLRLKEDENGGDAWLSADVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLNLELLDRFWRLSMPLGESRDHPLTNPFGAGSPNLEKVKLDPILVIVGGNELLKDRAEDYARRLKEQGKDIEYLEFEGCEHGFFTHDSYSQLGEEVIQILKQFMLRTSA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02959 327 Coils Coil 268 288 - -
Vian2g02959 327 PANTHER ARYLACETAMIDE DEACETYLASE 13 302 - -
Vian2g02959 327 Pfam alpha/beta hydrolase fold 74 302 IPR013094 GO:0016787
Vian2g02959 327 Gene3D alpha/beta hydrolase 18 326 IPR029058 -
Vian2g02959 327 SUPERFAMILY alpha/beta-Hydrolases 5 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02959 Vian-Chr2 50276353 50278799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02959 7 308 Carbohydrate Esterase AT5G16080 34.416 3.72e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02959 - - vun:114190999 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02959 2 50276353 50278799 Vian2g02959 2 50276353 50278799 ECH
Vian2g02959 2 50276353 50278799 Vian3g02578 3 40094678 40097449 PCT