Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02910 ATGGTTTCGCTGAAACTGCAGAAGCGGCTTGCAGCCAGCGTGCTCAAGTGCGGAAGAGGAAAGGTGTGGCTTGACCCCAATGAAGTCAACGACATCTCCATGGCCAATTCTCGGCAAAACATCAGGAAGTTGGTTAAGGATGGGTTTATCATTAGGAAGCCAACCAAGATTCACTCCCGATCACGTGCTCGTAGGATGAAGGAGGCAAAGAGGAAGGGCCGTCATTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACAAAGATACTCTGGATGAGAAGGATGCGTGTGCTCAGACGGTTGCTTCGCAAGTACAGGGAGTCAAAGAAAATTGACAAACACATGTACCATGATATGTACATGAAGGTCAAAGGTAATGTTTTCAAAAACAAGAGGGTTTTGATGGAGAGCATTCACAAGTCTAAGGCTGAGAAGGCCAGAGAGAAGACCTTGTCTGATCAGGTCCCGTTGATAAGGCATCTACAGCACCCAGTGCCCCAGCACCCCAACCTGCCCAAGCGCCAAAGAAATCCAAGAAGTGAGTATTTTTGA 564 0.484 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQVPLIRHLQHPVPQHPNLPKRQRNPRSEYF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02910 187 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Vian2g02910 187 PANTHER 60S RIBOSOMAL PROTEIN L19 1 163 IPR039547 GO:0003723|GO:0003735|GO:0022625
Vian2g02910 187 MobiDBLite consensus disorder prediction 166 187 - -
Vian2g02910 187 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Vian2g02910 187 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Vian2g02910 187 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Vian2g02910 187 MobiDBLite consensus disorder prediction 57 85 - -
Vian2g02910 187 FunFam Ribosomal protein L19 57 183 - -
Vian2g02910 187 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Vian2g02910 187 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Vian2g02910 187 FunFam Ribosomal protein L19 1 56 - -
Vian2g02910 187 CDD Ribosomal_L19e_E 4 158 IPR033935 GO:0003735|GO:0022625
Vian2g02910 187 MobiDBLite consensus disorder prediction 57 79 - -
Vian2g02910 187 Gene3D - 57 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02910 Vian-Chr2 49833650 49835345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02910 1 159 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 91.195 1.13e-104 297