Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02903 ATGAAGGGGAAAAGCCACAAGATTGGAAAGAAGCAGAGTAGGAAGATGAAGGGCGCGTTGACTAACAGCACCACCAGGCACTTGCAGCTTCAGCTAGGTCAAGTCTCCCTCATTCCTCTCAACCAACCATCTTCTACCACTTCTTCCGATGTTTCTTGCTTCCAGAACCTTCTGCATTCCGAACCTCCCAACACGTCTTCATCGCGCGTTCCGCTCACCGACGATTCCTTCGCCGACGACAGATACTGTATTCTCAGCCAGGACTTCTTCTGGTACTTATCTTATTATCCCTATCGAATTTTGCGATTTCGTTTCCTCTTTCGCTCACGCGGTTCCTTTTTTGTTCCTGGTAGCACTCCGGATTACATCACTCCGGACAATCAGCATACTTTGAATGGCTTTGATTGCGATATGGATACACCATGCCCCAAATCGCCTGAGAAGCTTAACACTACGAAGAGTAAGAGATGTCGACCAGATGTTATGTCGGTTCAACCTCTCAGCCCCACCTTTTCTGGTGACCATCAGCCAGCTGTGGAACTGGGAAAGGATTCTGTTGACGACGAATTTGCTTTGGAGAAAACAATAGCAGCTGCTAAACCAAAGGGTCAGAATTACGTGTCCCAATCTGCAATTGCATTGCGTTTCCGGGTTATGCCTCCTCCTTGCTTTAGGAACCCATTTTTAAAAGATGTTACAGAAAAGGAGATTGATTCTTTTGGAAACCAAAGATTGAAATGTGCAGGCCTCTTCCCTGCAATCAGTGGTGGTGACGGGCTTTCACGCTATCGTGCTGACTTTCATGAAATTGAGCAAATTGGTGGAGGGAACTTTAGTCATGTTTTCAAAGTATTAAAACGACTAGATGGATGTTTGTATGCTGTTAAACGGAGCATCAGACCGTTACGCCTTGAAACAGAAAGGACAAAAGCTTTGATGGAAGTTCAAGCTTTGGCGGCCCTAGGTTTGCATCAGAACATCGTGGGCTACTATTCTTCATGGTTTGAAAATGAACAGCTGTACATTCAGATGGAGTTATGTGATCACAGCTTATCTATAAGAAAATGCCCAGAGGCATTTACAGAAGCACAAGTGTTAGATGCCTTATTTCAGGTTGCCAATGCTCTGCGATTTATTCACGAGAAGGGAATGGCTCATCTAGATGTGAAACCCAATAATATTTATGTGAAGAGTGGTGTTTATAAACTCGGTGATTTTGGATGTGCGACTCTTCTTGATAGTAGCCTCCCAATTGAAGAGGGTGACGCACGTTATATGCCCCAGGAAATTCTTAATGAAAATTATGATTATCTAGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTAATCCGCAGATTGCCTTTGCCAGAATCAGGATGTCAATATTTTAACCTCAAGGAAGGCAAGTTTCCCCTCTTGCCTGGTCATTCCTTGCATCTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCGGTTAAGCGGCCTTCTGCTAGAGAATTGGTAGAAAACCCAATTTTTTGTAAGAAGATTCAAAGAATTGCGTGA 1560 0.4391 MKGKSHKIGKKQSRKMKGALTNSTTRHLQLQLGQVSLIPLNQPSSTTSSDVSCFQNLLHSEPPNTSSSRVPLTDDSFADDRYCILSQDFFWYLSYYPYRILRFRFLFRSRGSFFVPGSTPDYITPDNQHTLNGFDCDMDTPCPKSPEKLNTTKSKRCRPDVMSVQPLSPTFSGDHQPAVELGKDSVDDEFALEKTIAAAKPKGQNYVSQSAIALRFRVMPPPCFRNPFLKDVTEKEIDSFGNQRLKCAGLFPAISGGDGLSRYRADFHEIEQIGGGNFSHVFKVLKRLDGCLYAVKRSIRPLRLETERTKALMEVQALAALGLHQNIVGYYSSWFENEQLYIQMELCDHSLSIRKCPEAFTEAQVLDALFQVANALRFIHEKGMAHLDVKPNNIYVKSGVYKLGDFGCATLLDSSLPIEEGDARYMPQEILNENYDYLDKVDIFSLGASIYELIRRLPLPESGCQYFNLKEGKFPLLPGHSLHLQNLLKVMMDPDPVKRPSARELVENPIFCKKIQRIA 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02903 519 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g02903 519 FunFam Wee1-like protein kinase 346 516 - -
Vian2g02903 519 Pfam Protein kinase domain 267 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02903 519 FunFam WEE protein kinase 257 345 - -
Vian2g02903 519 Gene3D Phosphorylase Kinase; domain 1 258 345 - -
Vian2g02903 519 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 106 512 - -
Vian2g02903 519 SMART serkin_6 267 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02903 519 ProSiteProfiles Protein kinase domain profile. 267 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02903 519 SUPERFAMILY Protein kinase-like (PK-like) 260 513 IPR011009 -
Vian2g02903 519 ProSitePatterns Protein kinases ATP-binding region signature. 273 296 IPR017441 GO:0005524
Vian2g02903 519 Gene3D Transferase(Phosphotransferase) domain 1 346 516 - -
Vian2g02903 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02903 Vian-Chr2 49768968 49771997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02903 11 511 Core Cell Cycle Gene Families AT1G02970 55.050 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Vian2g02903 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02903 K06632 - gmx:547742 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02903 2 49768968 49771997 Vian2g02903 2 49768968 49771997 ECH