Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02878 ATGATTACTTTACCTCATCCTATGTTTCTGTTTCTATTGTTTCTTTCACTTCTAACAAGCACTGGCCAAATGGTATTTGCAAAAGGGAAGGAGAATGTCACAGAGGCTTGCAGTGTGACAAGGTATCAAAGCCTTTGTATTCACTCTCTGTCACAATTCTCCAACACTGCTGGAAGAAGCCCTAGCAAGTGGGCACGTGCGGGAGTGTCAGTGTCCATTGGCGAGGTTAAGAATGTTAAAGCGTATCTTGCAGAATTGAAGAAGCATGGACTCATGAAGGGAAGAAACAAAGTTGCCCTTTCAGATTGTGTTGAATGTTTTTCCTATGCCCTTGACGAGCTTCACAGATCACTTGGTGTGCTTAGGAGGCTAAGCAAAAGCACGTTTAGCACCCAAATGGGGGACCTGAACACGTGGATCAGTGCAGCACTCACCGATGAAGAAACTTGCCTGGAAGGGTTTGAAGGAGAAAATGAGAAGCACGTTAAAGTGCTGCAAAACCGTGTTCAGAATGTGTCTTACATCACCAGCAACGCTCTTGCTCTTGTCAACAAACTTGCCACCACAGGTCTGGGAAGAATCAACGACCCATAG 594 0.4529 MITLPHPMFLFLLFLSLLTSTGQMVFAKGKENVTEACSVTRYQSLCIHSLSQFSNTAGRSPSKWARAGVSVSIGEVKNVKAYLAELKKHGLMKGRNKVALSDCVECFSYALDELHRSLGVLRRLSKSTFSTQMGDLNTWISAALTDEETCLEGFEGENEKHVKVLQNRVQNVSYITSNALALVNKLATTGLGRINDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02878 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
Vian2g02878 197 Pfam Plant invertase/pectin methylesterase inhibitor 33 182 IPR006501 GO:0004857
Vian2g02878 197 FunFam Pectinesterase inhibitor 3 28 187 - -
Vian2g02878 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
Vian2g02878 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Vian2g02878 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Vian2g02878 197 CDD PMEI-like_3 36 188 - -
Vian2g02878 197 NCBIfam pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02878 Vian-Chr2 49607068 49607661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02878 36 191 Carbohydrate Esterase AT3G14310 34.161 2.40e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02878 - - gmx:100791264 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02878 2 49607068 49607661 Vian2g02878 2 49607068 49607661 ECH