Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02834 ATGGCAGAGGTTGTTTTGTTAGTCGATGATTTGAAATTGCTTTCTGGGATTCCTCGCTGTAGAATTTGTCATGAAGAGGAGTTTGAAAGCATAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGCAATATGAACCCGGATATTCAGCTCCACCCAAGAAGTCTAAGATAAATGATGAAGCAATGTCCATTAGGGAGGAAGAAGAAGAGTCAAACGAAAGAACAGAGATAACGGTTGAAGGAGTTGCAGTGGAAAGCGATTACTCGGAATGCAGTTCAGGCGGTGACAGAAGCGCGTCTTGCTGTCGATCCCTTGCAATAGCTAGTGGACTCAGACTCACTTCTGCTATTGCCAACTGCATTGCCAGTTGCGTTGAATTGGGCAACGCATGGCCGCCCCAAGAGTTGAAATCAACATTCTCTCTTTCATGTGGTTGTGTTGTACTGCTTTCAAATGGAACGCAAGATTACCCATTTACTCTACTTACTGTCATTATATTAAAGGCTAGCGGAATTATTATACCTATGTACATAGTTATTAAGATTGTTGGAGCCATTCAGAACAGTAGTGAGCAGTATCAGGATTCTGACGATGAAGATGAGATACGTCATAATGTAAATTCATAG 636 0.4214 MAEVVLLVDDLKLLSGIPRCRICHEEEFESIETLEAPCACSGTVKQYEPGYSAPPKKSKINDEAMSIREEEEESNERTEITVEGVAVESDYSECSSGGDRSASCCRSLAIASGLRLTSAIANCIASCVELGNAWPPQELKSTFSLSCGCVVLLSNGTQDYPFTLLTVIILKASGIIIPMYIVIKIVGAIQNSSEQYQDSDDEDEIRHNVNS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02834 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 47 IPR013083 -
Vian2g02834 211 Pfam RING-variant domain 20 45 IPR011016 GO:0008270
Vian2g02834 211 Pfam Protein of unknown function (DUF3675) 151 185 IPR022143 -
Vian2g02834 211 Pfam Protein of unknown function (DUF3675) 49 111 IPR022143 -
Vian2g02834 211 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 45 195 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02834 Vian-Chr2 49230206 49232175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02834 - - vum:124822982 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02834 2 49230206 49232175 Vian2g02834 2 49230206 49232175 ECH
Vian2g02834 2 49230206 49232175 Vian3g01598 3 17547743 17550114 PCT