Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02825 ATGGAAAATGATCAATTTTCATCTACAGCTTTAAATTTAAGAGAAATCCTAGTGGGTTATGGCTCTACACAAGAGGATGTGTTTCAAGAGAAAGAGAGTTTTTCTGGAATGGAATTGCTGGGACCTATTGAGGATGAAAAAGGAACCAAACTGTTCGAGGATGAAGATCAGAAACAGCTACAAGAACCCCAAGTCTATAAGTTGTTAGAAGTGTTTAACTGTGATTATGATATGCAACTGAAACCGACACCACAGTTCGATGAAACTACGTGGCCAGCGAAGCATGACATAGAATCAGCTGAACACAATAATCATGTGTCACCATCATTAGCATCCTTAGAGCTGCTGAGAAACTACAGAAGCAGATTTAAGAGGATAAGCGAGCAAAATATAGCGAAACCTTCTTTGGATCACCACCAGATATCAACTGAAGAAATTATAAGAGTAGCTGGAGCAAGATATGTTCAGTATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATACGGATTGGATTTTGGATGTTTGTCTGAGGAGGAAAATAGAGACGTAGAACTTGCTCAGTTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCCACCAGTTTGAACGTGCAAGCAGATTACTTCTCCACTGTCAACTGAATTCATCACCCAATAATGGAAGCCCCGTTCAAAGAGTTATCTTTCACTTCGCCCAAGCACTTCGAGAGAGAATCGACAGAGGACTAGGAAGAACGACAGCGAAGGGATCAGAGAAAAAAGAAGAAAGGGAGTGGATTCAAAAGATTGACACCAATGTTGCCCTAACATTCCATCAAAATATTCCTTTCAATCAAGTCATGCAATTCACTGGAATACAAACTATAGTGGAACATGTTGCATCTGAGACCAAAATTCATGTTATTGATTTCGAAACAATATGTGGGGTGCACAATACAATATTGATGCAAGCACTGACAGAACGCCAGGATTGCAAAGTGCAACTTTTGAAGATAACTGCACTTGCACTTAATTCATGCAGAAGCATGATACAAGAGACTGGAAAAAGGTTAGCTAGTTTTGCTGAATCATTGAACTTACCCTTTTTATATAATGCAGTTTTTGTGACAGACTTTGCAGAGATAAGGGAAGGTGATTTTGAAATTGGAGAGGGTGAAGCAGTGGCTGTGTACTCTCCATATTTTCTGAGGTGCATGGTATCAAGGCCAGATTGTATGGAAAACTTGATGAGGGTTATATGGAATATGAAGCCGGTTATAATGATAGTTCTTGAAGTTGAAGCAAACCATAACTCACCCATCTTTGTGAACCGGTTCATTGAAGCATTGTTCTTCTACTCAGCTTATTTTGATTGCCTTGGAAGCTGCATAAATGATGAGAATGAGAGCAGAAGGAAAATAGAAACAGTTTTATCTGAGGGGATAAGGGAAATTGTTGCAATGGAAGGGAGAGAAAGAAAAGTTAGAAATGTGAAGATAGATGTTTGGAGAAAGTTCTTTGCAAGGTATCGAATGGTAGAAACAGGGTTTAGTGAGTCATCTCTTTACCAAGCTCACCTGGTGAACAAAGAGTTTGCTTTTGGGAAATTCTGCACTCTAGAAAAAAATGGCAAGTGTATTATAGTTGGATGGAAAGGGACCCCAGTTCATTCGGTCTCGGCTTGGAGGTTTCTTTGA 1686 0.3986 MENDQFSSTALNLREILVGYGSTQEDVFQEKESFSGMELLGPIEDEKGTKLFEDEDQKQLQEPQVYKLLEVFNCDYDMQLKPTPQFDETTWPAKHDIESAEHNNHVSPSLASLELLRNYRSRFKRISEQNIAKPSLDHHQISTEEIIRVAGARYVQYSAHWNDSFCIPMHPYGLDFGCLSEEENRDVELAQFLLAAAERVGCHQFERASRLLLHCQLNSSPNNGSPVQRVIFHFAQALRERIDRGLGRTTAKGSEKKEEREWIQKIDTNVALTFHQNIPFNQVMQFTGIQTIVEHVASETKIHVIDFETICGVHNTILMQALTERQDCKVQLLKITALALNSCRSMIQETGKRLASFAESLNLPFLYNAVFVTDFAEIREGDFEIGEGEAVAVYSPYFLRCMVSRPDCMENLMRVIWNMKPVIMIVLEVEANHNSPIFVNRFIEALFFYSAYFDCLGSCINDENESRRKIETVLSEGIREIVAMEGRERKVRNVKIDVWRKFFARYRMVETGFSESSLYQAHLVNKEFAFGKFCTLEKNGKCIIVGWKGTPVHSVSAWRFL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02825 561 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 134 549 IPR005202 -
Vian2g02825 561 Pfam GRAS domain family 190 559 IPR005202 -
Vian2g02825 561 ProSiteProfiles GRAS family profile. 180 559 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02825 Vian-Chr2 49149013 49150789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02825 187 560 GRAS Transcription Factor Family AT1G66350 28.000 5.30e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian2g02825 GRAS 1.3e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02825 - - vum:124820400 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02825 2 49149013 49150789 Vian2g02825 2 49149013 49150789 ECH