Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02822 ATGTCAATCGGTATGTTAAAAAGGTTTCAAGGCTTGCTGCTGAAATGGATGCTTATATTATCTTGCCTGGCATTTATGATTGTGGCTGGTGAAAATGATAAAACAGTGGAGCCCCTTTCTTTATATGATTCTAGATCACCTTTAGCCTTTGCTGTTGTTCACGATCTACCTCTACCAGCAAGTCTCCATTTGTCAAAGCACGTGCTTTCTCAAGGTGCGCCAATTGAAGCACCGTCACCAGTCAGTCCTCCCTCATATGGTCCTTTCTCAAGTAATGGCCAGTCCCCTAAAAGTTCACATTTATCTATACCATTCAAAATGAAGAGTGAAATGAAAGATCCAACTCCTGGCTTTAAATATATTGCTCCTGCAGCTGCAGGCCCTTCTGCTTCAACTCAGCCACCATTGTCTCCTTATGCATCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGCCAGTAAGAGTTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAGTCCTAGTTGGAATGATTTTCTTAATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTTCTCAGTGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTAAACTAGACCCTCGATTAGTGGGTGGATACCAACTTCTCAATATAACTTGGTTCGAACCACCAGCGCCTTCACAAGCTCCTAGGGTAGCTGCATCACCTGTGAAAACACCTTCGTATCATTCACCTACCGCTATATCATCATCTGGTTCTTCAGGACGGCATTCAAATCTGTTTATTATTCTTGGAATTGTTATTGGCATAATCTTTATTGGTATCATATCTGTCCTTATATTCTGTTTATGTACATTCCTGCCCAAAGCAAACGCTCCTCCTGGGGAAACTGAAAAGCCAAGGATAGAGAGTACAGTTTCAGCTGTGGGTTCTCTTCCTCACCCGAGTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGCGTACTTGGAGAAGGAGGGTTTGGAAGAGTTTTTAAAGGTGTCTTGAATGATGGTACTCCTGTTGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAAGTGGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACGCATCACAAAATTTACTTTGCTATGAGCTTGTTCCCAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCACTTGATGCTGCAAGGGGACTTTCATACCTGCACGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCCGATCAAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCAACTGGGCAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGATAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAAGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCTTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCGTCACAGAATACCATGATTCTCTGTTGGCCTCATCCAATACTCGAGCCAACCTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGAACATCTTCTGTATTCTCTTCAGGTCCTTACTCTGGCATAAGTGCCTTTGAAAATGACAACATTTCAAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATAA 2145 0.4256 MSIGMLKRFQGLLLKWMLILSCLAFMIVAGENDKTVEPLSLYDSRSPLAFAVVHDLPLPASLHLSKHVLSQGAPIEAPSPVSPPSYGPFSSNGQSPKSSHLSIPFKMKSEMKDPTPGFKYIAPAAAGPSASTQPPLSPYASNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQSPSWNDFLNELAVQLGLRNTQIELINFYVLSVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPRVAASPVKTPSYHSPTAISSSGSSGRHSNLFIILGIVIGIIFIGIISVLIFCLCTFLPKANAPPGETEKPRIESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDASQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVTEYHDSLLASSNTRANLRQSSSTFEFDGTSSVFSSGPYSGISAFENDNISRTVVFSEDLCEGR 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02822 714 MobiDBLite consensus disorder prediction 81 100 - -
Vian2g02822 714 Pfam Protein kinase domain 371 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02822 714 PANTHER OS01G0750732 PROTEIN 140 661 - -
Vian2g02822 714 FunFam Receptor-like serine/threonine-protein kinase ALE2 350 447 - -
Vian2g02822 714 SUPERFAMILY Protein kinase-like (PK-like) 345 647 IPR011009 -
Vian2g02822 714 ProSiteProfiles Protein kinase domain profile. 370 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02822 714 CDD STKc_IRAK 376 646 - -
Vian2g02822 714 FunFam Receptor-like serine/threonine-protein kinase ALE2 448 665 - -
Vian2g02822 714 MobiDBLite consensus disorder prediction 86 100 - -
Vian2g02822 714 Gene3D Phosphorylase Kinase; domain 1 351 447 - -
Vian2g02822 714 Gene3D Transferase(Phosphotransferase) domain 1 448 667 - -
Vian2g02822 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Vian2g02822 714 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02822 Vian-Chr2 49131035 49136009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02822 12 714 Receptor kinase-like Gene Family AT4G02010 67.511 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vian2g02822 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02822 - - gmx:100775615 1240.33