Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02808 ATGAAGATTGAAAGGAATATCCTGGGATTGCCAAAAAACTCATTCCCCTCTCTTGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAACGAAAACCTGATGGCATTTCGCGCGAGGTGTATGCGCTTACAGGTGGATTGGCCCCTCTTATGCCTTCTATTGAAGCTTCTCAATTGAAGAAAAAGCCTCCTCCTGTCGAAAAGATCACTTGGCAGTGGCTTCCTTTCACCAGCTCTGCTCGAAAAGATAATCTTCAACTTTACCACTGGGTTCGAGTTGTCAATGGCGTTCCTCCCACGGGGGACTATTCTTTTGCCAAGTATAATAAGGCAGTTGATGTGATCAAATACACAGATGAGGAGTATGACAAGTTTTTGACAAATCCTATGTGGACCAAAGAGGAGACTGATCAACTATTTGACCTATGTGAGAGATTTGATCTCCGATTTGTTGTAATAGCCGATAGGTTTCCATCATCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTTTCGCGGGCTATATTGGTTGCTAGAGCTCCATCTTCTGGTGATGTTGCAGCAAATCCTCTTGTTAAGGAACTGTATAATGTTTCACAAGAAATGGAGCGAAAGCGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGCAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCTGAATCTCGCATTCCACCCAAGGTTGCTGAAGAGTCTCATTTGGCTGCTTCTAATGCTGGTGCAGAAGCTACAGAAAGAGCTGTCCCTGGTGAAACTGTATCTCCATCGAATGTGCAACTTCCATCAATGGTTGTGCCTCCTACATTATCAGATAACGCATCTACTCTAGCTTCTCTTCGCATGCTTCGTGTATATTTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCAAACTCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACCTTGCAAGACCTTGGGGTCAATTTGAAACCAAGAGTTCCAACAAAAGCTGTTTGTGCGGAGCACCTTGAATTAAGAAAAGAAATACTAACTTGGCTTAATCTCCAGAAACAGGTTCAATATAAAGAGGCCGAAGGTTCCTCTTTTCGTGATGGGTCATATGGTGAAACACCTGGCACACCTAAGCATTTACATCGTGCTGGGGATCAGGATCGAACATTCATTCCAGATGCAATGAATTTTGGAGTGGAACGGGTTAGCAAAAAGGACCAAAAGCGTAAGGTACACTACAGAGCACCTGGAGCTCCATCGGCTCATAAAAGACCTAGAAAACTAAAGGCCACAGATCTCTAG 1332 0.4384 MKIERNILGLPKNSFPSLEKKSRPPKESQRKPDGISREVYALTGGLAPLMPSIEASQLKKKPPPVEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKAVDVIKYTDEEYDKFLTNPMWTKEETDQLFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVSRAILVARAPSSGDVAANPLVKELYNVSQEMERKRALSMVLSQTRQQERRDEEVLVEAKRIAESRIPPKVAEESHLAASNAGAEATERAVPGETVSPSNVQLPSMVVPPTLSDNASTLASLRMLRVYLRTYALEQMVQAANSSAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKHLHRAGDQDRTFIPDAMNFGVERVSKKDQKRKVHYRAPGAPSAHKRPRKLKATDL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02808 443 SUPERFAMILY Homeodomain-like 126 175 IPR009057 -
Vian2g02808 443 MobiDBLite consensus disorder prediction 372 394 - -
Vian2g02808 443 FunFam DNA methyltransferase 1-associated protein 1 98 185 - -
Vian2g02808 443 Pfam SANT/Myb-like domain of DAMP1 102 176 IPR032563 -
Vian2g02808 443 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 6 431 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Vian2g02808 443 MobiDBLite consensus disorder prediction 243 270 - -
Vian2g02808 443 SMART sant 126 175 IPR001005 -
Vian2g02808 443 MobiDBLite consensus disorder prediction 19 34 - -
Vian2g02808 443 MobiDBLite consensus disorder prediction 417 434 - -
Vian2g02808 443 MobiDBLite consensus disorder prediction 411 443 - -
Vian2g02808 443 Gene3D - 99 185 - -
Vian2g02808 443 MobiDBLite consensus disorder prediction 1 35 - -
Vian2g02808 443 CDD SANT_DMAP1_like 130 172 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian2g02808 SANT_DAMP1_like 1.1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02808 K11324 - gmx:100818926 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02808 2 49008414 49016689 Vian2g02808 2 49008414 49016689 ECH