Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02800 ATGGAAGAAACATTTGTACCCTTTGAAGGAATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGTGGACTCAAAGCAGGTTTAAGGATTTGGGCGCCCACCACATACATATTCTTTGCTTCGGCAATACCGGTCATTTCATTCGGGGAACAACTAGAGCGAGATACTGACGGTGTTCTAACTGCTGTTCAAACATTGGCATCCACTTCGATATGTGGCATCATACACTCAATCCTTGGAGGTCAACCTCTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGGATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCAGTGTTGCTATTCCTGCTGGCCATCTTGGGAGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAGTTATTTGGCATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTCGTGGATGAGTTTCGCATACCACAACGAGAAAATCCAAAATCAGTTCAGTTCATACCTTCATGGAGGTTTGCTAACGGGATGTTTGCTTTAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCCAGGTCATGGCGCTATGGTTCTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTAGTTTGGACAGGTGTATCCTACCTGCCTTCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTGTTAAGGATATGGTTCATGTTCCTGTTGTCTACATAATTGGAGCATTTATCCCAGCCACTATGATTGCTGTGCTTTATTACTTTGACCACAGTGTAGCATCCCAGCTTTCCCAGCAGAAGGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCAGCAAATGGAGTTATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGGTAGAAGTATACCATCAAATGCAGACGCCTCTTATTTACCAGGATCCCTCTGCTCGAGCACAAGGACTAAAAGAACTTAAAGAATCAACTATTCAAGCAGCTACCAGTATGGGAAACATGGATGCCCCAGTTGATGAAACTATATTTGACGTTGAGAAAGAAATAGATGATTTGCTGCCTGTGGAGGTTAAGGAACAGCGTCTGAGTAACTTGCTTCAAGCAATAATGGTGGGAGGATGCGTTGCAGCCATGCCTGTCCTCAAGAAAATACCAACCTCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAATTCTGGGAAAGGATCTTATTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTACCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTCCCCATGATGATCATGCTCTTAGTTCCTGTAAGACAGTACTTTCTCCCCAAATTTTTCAAGGGGGCACACCTTCAAGACTTGGATGCAGCAGCGTATGAAGAGCAAACAGCTTTGCCATTCAACCTTGCAACGCAATCAGAGTTTGGAGGTGGTGCTTCTCATGTTGGAGAAGGTGAGATCCTAGATGAAGTTATCACAAGAAGCCGTGGCGAGTTTAGGCACACCAGCAGTCCAAAGATCACAAGCTCCACCCCAACACCAAAAACTGATCCTAGAAGCCATCTAAGCCCACGTCTCTCGTTTAGTTCACGCGTGGGTGAGCTGAAAACTGAGCAAAGTCCTCGATCTGGTGCAAGAGGTTCCCTCAGTCCAAAGGCTGGAGAAGTGAGACTATCAAATCTGGGAAGAAGTCCTCTTAATCAGGATTCAAAACAGCAGGACCACAACTAA 2172 0.4498 MEETFVPFEGIKNDLRGRLMCYKQDWTGGLKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTAVLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPQRENPKSVQFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYLPSGSVPHGIPRRLFSPNPWSPGAYENWTVVKDMVHVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASLGQLYGNMVEVYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQTALPFNLATQSEFGGGASHVGEGEILDEVITRSRGEFRHTSSPKITSSTPTPKTDPRSHLSPRLSFSSRVGELKTEQSPRSGARGSLSPKAGEVRLSNLGRSPLNQDSKQQDHN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02800 723 MobiDBLite consensus disorder prediction 641 723 - -
Vian2g02800 723 MobiDBLite consensus disorder prediction 649 693 - -
Vian2g02800 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vian2g02800 723 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Vian2g02800 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Vian2g02800 723 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02800 Vian-Chr2 48914418 48918175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02800 1 694 Antiporters AT3G62270 82.734 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02800 K24194 - gmx:100776705 1377.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02800 2 48914418 48918175 Vian2g02800 2 48914418 48918175 ECH