Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02793 ATGGATGACTGTTGTGCTGTTTGCGCAGAGCCTTTGGAATGGGTCGCCTACGGACCCTGTTTGCACCGGGAGGTGTGCTCCACGTGCGTCGCTCGCCTCCGTTTCATATGCGACAATCGCTGTTGCTGCATCTGCAAGACCGAATGCAACCACGTATTCGTCACCAAGGCTCTAGGAGATTATACAAAGATGATTAATGATTTTGCTGCCCTTCCTTCGGATGTAAGGGAGGGCAAGATTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGTAGACTTTCGTGCAGTATATGTGACAAGACGGATGAACAACCACAGGGTTCTGCTTCAAGGCGACGAGAACAGTTTAAGAATATAGGGCAATTGAAGGGTCATATATTCCACCGTCACAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGCAGGAAGGTTTTTATATGTGAGCAAAAGCTATATACCAGAGCACAGTTGAATCAACACATAAGCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCATGGGGCATCCCATATGTGAATATTGCAGAACCCGATTTTATGGAGACAATGAGTTGTACGTGCATATGTCTACAGAGCATTATACTTGTCATATATGCCAGAGGCAGCATACAGGGCAGTATGACTACTTTAAGAATTATGATGACCTAGAGATTCACTTCCGTAAAGAGCACTTCTTATGTGAAGATGAGGCTTGTCTTGCTAAGAAATTTGTTGTTTTTCAATCTGAAGCAGAGATGAAGAAGCATAATGCTATCGAACATGGAGGACGGATGTCACGATCTAAGCGGAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACATGGTAATGAACAAGAGCAACGCCGTGGAAGAAATCGTTCTTTTCGTCGTGATTTTACTGAAAACCAACTTGCGATGGCCATTGAAGCTAGTCTAGAAACAGCTAATGTAGAGCAAACATTTCGTAATCAATCAGCATCAGGTAGTGGGCAAGTTGCTGTTGATGATGGGAATGGAGACATTGATTCTTTCATTCAGCCATTTGAATCATTGGCTGTCACTGGTTTTGAAGCATCTTCAAGATACCTTCAAGCCTTGGGACATAGCTCAAGGAGTGGACCACTGGAGGATTCTTCATTTCCACCACTACCCGTAACTTCCAACAATGGCCATCAAGGATCCAAACAGGAAGTCGAAGGCTCATCTAGTAATTCCATGGCTGCACGTCTGCGTCGTCATAACAACAGAACTGTAACAGTTGTTAATTCTGGTAATGCTTGGCCAGCAGCAGGTCGTGGACTGGTACAACCGTCAAGTAATCCTTCACAATTTGGACAGTCATCAAATAATGCTCTGGGTCTTTCTCGTAAGTCTGGGCAGACAAAGAAGACTGTAATTAACAGTGGACTTTCATCATCAACTTATGCTGGTTCTATTCAGTCTACCCAAAGAACTTCTCGTGGACACTTACCTGGTGGTTCATCGAGGGACACACGTGACAATGTTAGAATTGTTCACTCTGCATCTGCCCCGAATCTCATGGAGAACAACTCTGTTGAAGCTTCACTATCTGATTTTCCTCCTGTTTCTGCTCCACAAGCGAGCAAGATACCTGCTAGCAGTCATTCTTCATTGAATGTGGAAAATGTTCAGTCTGCTAACCAGTCCCTGATTGAAAAGATTCGATGTGCTCTTGATTTTGATGAAGAAAGATACAGTATGTTTAAGGATATATCTGCCCAATATGGCCAAGGCACAATAGATACGGAAACGTATATGGACTATGTGCAGAACTTTGGCTTGTCTCGTCTTGTGCTTGAGTTGGCAAGATCATGCCCTGATACTCAGAAGCGGGCAGAGCTTGTTAGTGCTAGCTTGCAAAGAGATGTTTTACTGGAAAATAACTTGGTTCAAAGCAGCACAAGCACCCATCGCAAAGACAGTAATGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACCCCACAGAGAAATTAGCAGATAACTTTTTAAGCACCGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGAGAAGGTGGAGGTGCTATCAAGGGATGATTACCGAAGCGACAGGGGCAAATTAAAAATCGAACAGCGGACTGATACCAATTCTGGAAGTCAACCTGCGGTGAAGCTTAGTGGGAAGACTGAAACATCAAATGGCAGTTTATCTACTCAAGTTAGAGAGGATGGTGGTGGTGGGAACAAGCAACGCAAGAAAGGTTCAAAGTTCCTGAGAGTGCGACTTGGTGATGGTTCTGCTTCGGCCCTTTTTGATCAACCTGATCCTGGAAAAACAGACAGCTCAGAAGTTAACGATGAACCTGGAGGAGGGCCACCTGTGCGTGGTGTTTGGCGAAAAGGGGGAGGTCATAAACTTTTTCCCTAA 2496 0.4407 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDNRCCCICKTECNHVFVTKALGDYTKMINDFAALPSDVREGKIGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSICDKTDEQPQGSASRRREQFKNIGQLKGHIFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPICEYCRTRFYGDNELYVHMSTEHYTCHICQRQHTGQYDYFKNYDDLEIHFRKEHFLCEDEACLAKKFVVFQSEAEMKKHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEQEQRRGRNRSFRRDFTENQLAMAIEASLETANVEQTFRNQSASGSGQVAVDDGNGDIDSFIQPFESLAVTGFEASSRYLQALGHSSRSGPLEDSSFPPLPVTSNNGHQGSKQEVEGSSSNSMAARLRRHNNRTVTVVNSGNAWPAAGRGLVQPSSNPSQFGQSSNNALGLSRKSGQTKKTVINSGLSSSTYAGSIQSTQRTSRGHLPGGSSRDTRDNVRIVHSASAPNLMENNSVEASLSDFPPVSAPQASKIPASSHSSLNVENVQSANQSLIEKIRCALDFDEERYSMFKDISAQYGQGTIDTETYMDYVQNFGLSRLVLELARSCPDTQKRAELVSASLQRDVLLENNLVQSSTSTHRKDSNVNKKGKGKSVDSRGSNPTEKLADNFLSTVHQLQANYKSSEEKVEVLSRDDYRSDRGKLKIEQRTDTNSGSQPAVKLSGKTETSNGSLSTQVREDGGGGNKQRKKGSKFLRVRLGDGSASALFDQPDPGKTDSSEVNDEPGGGPPVRGVWRKGGGHKLFP 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02793 831 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Vian2g02793 831 MobiDBLite consensus disorder prediction 735 767 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 713 734 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 547 566 - -
Vian2g02793 831 Coils Coil 701 721 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 458 515 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 660 692 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 452 524 - -
Vian2g02793 831 MobiDBLite consensus disorder prediction 708 831 - -
Vian2g02793 831 CDD RING-HC_ZNF598 3 54 IPR041888 -
Vian2g02793 831 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Vian2g02793 831 MobiDBLite consensus disorder prediction 391 430 - -
Vian2g02793 831 PANTHER ZINC FINGER PROTEIN 598 1 739 IPR044288 GO:0061630|GO:0072344
Vian2g02793 831 SMART c2h2final6 197 220 IPR013087 -
Vian2g02793 831 SMART c2h2final6 221 251 IPR013087 -
Vian2g02793 831 SMART c2h2final6 252 281 IPR013087 -
Vian2g02793 831 SMART c2h2final6 108 145 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02793 1 830 C2H2 Transcription Factor Family AT3G62240 50.869 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02793 K22381 - gmx:100780426 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02793 2 48852127 48855891 Vian2g02793 2 48852127 48855891 ECH