Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02779 ATGGAAGACGAGCCTTTTCTCACAACAACAACACTCGCTTCCCAACGGGCCGATTTCCACTTGCAATCTTCCAAGTCCTTCGACGACGTCACGGCGCCACGCGCCGCCCGTAACGCCGAGATTCAAGAACACCTCTCCCAACCCTCTCCCTTTCACTCCAAGAAGAAAAAGCTCAGTCGTTGCAAGACAGCACCCGCCCTGGTTAGCATGCGAGACCTCAAACCTAAGATGCCCGAAGTCCCCAAGCCTCAGTCCAGTTCCATAATCCGCCAAGGCATGTGCTTACTCGCCATGTACCTCTGTGTGGGAGTCGCCATTTACTCTTTCAACAGGGACAATTTCTCCGGCATCGAGACCCACCCCTTGGTCGATGCCCTTTACTTTTGTATAGTTACCATGTGTACCATAGGTTACGGAGACATCGCTCCCTTGACCCCGCTTACAAAGGTTTTCGCTTGTGTCTTTGTTCTGGTGGGGTTCGGCTTTATAGACATACTCCTCAGTGGCCTTGTCAACTTTGTTTTGGATGTGCAAGAGAACATGATCCTCACGGGGCTCCAAATGGGTGCAACTGGGAGGGAGGGCTTTTCTGCCCGGAACTACATCGTTGATGTGGTGAAGGGGAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTTGTGCTTTGTATTGGGATTGGGTGTTTGGTTTTGTACTTTGTGGAGGGCTTGGATTTGGTTGATTCTATTTACTTGTCAGTCATGTCTGTCACAACGGTTGGGTATGGGGACAGGGCGTTTAAGACACTTCCCGGTCGGTTATTTGCTGCTATTTGGTTGCTCTTTTCAACTTTGATGGTTGCACGGGCTTTCCTCTATTTGGCAGAGGCCAGAATTAATAGAAGGCATCGCAGAATGGCCAACAAGGTGTTGCAGAGAGAAATTACTGTTGAGGATTTGCTTGCTGCTGATATCAACCACACCGGTTTCATCAGCAAGTCTGAGTATGTAATCTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTGTTGCAAATTTGTGACCAATTCAGGAAGCTTGACCCTTCTGACTGTGGGAAGATAACACTGCCTCATCTCTTAGGGGGCACTTTATGA 1131 0.4898 MEDEPFLTTTTLASQRADFHLQSSKSFDDVTAPRAARNAEIQEHLSQPSPFHSKKKKLSRCKTAPALVSMRDLKPKMPEVPKPQSSSIIRQGMCLLAMYLCVGVAIYSFNRDNFSGIETHPLVDALYFCIVTMCTIGYGDIAPLTPLTKVFACVFVLVGFGFIDILLSGLVNFVLDVQENMILTGLQMGATGREGFSARNYIVDVVKGRMRIRLKVGLALGVVVLCIGIGCLVLYFVEGLDLVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARINRRHRRMANKVLQREITVEDLLAADINHTGFISKSEYVIFKLKEMGKIQEKDVLQICDQFRKLDPSDCGKITLPHLLGGTL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02779 376 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 123 349 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vian2g02779 376 Pfam Ion channel 224 292 IPR013099 -
Vian2g02779 376 Pfam Ion channel 96 174 IPR013099 -
Vian2g02779 376 Gene3D - 198 319 - -
Vian2g02779 376 Gene3D - 70 184 - -
Vian2g02779 376 PRINTS Two pore domain K+ channel signature 131 159 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vian2g02779 376 PRINTS Two pore domain K+ channel signature 254 263 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vian2g02779 376 SUPERFAMILY Voltage-gated potassium channels 206 314 - -
Vian2g02779 376 ProSitePatterns EF-hand calcium-binding domain. 320 332 IPR018247 -
Vian2g02779 376 FunFam Two-pore potassium channel 3 199 313 - -
Vian2g02779 376 SUPERFAMILY Voltage-gated potassium channels 89 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02779 Vian-Chr2 48745579 48747621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02779 12 376 Ion Channels AT4G01840 63.441 6.73e-162 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02779 K05389 - gmx:100801488 600.512