Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02778 ATGGAATTGTGTGTGATAAGAAGAAATCGAGGCCTAGTTAAGCCAGGGAAGGAGACTCCCTTGAGCACACTAGATTTGTCAGTGATCGATAGGTTACCTGTTCTAAGATGCAATGCTCAAACCTTGCATGTGTTCAAACACGGTCCTCAAGCAACAAGGGTGATAAAAGAGGCCCTCTCCAAAGCACTCGTTCCCTATTACCCTCTTGCGGGGAGACTCAAAGAATCGCAAATAGGGTGCCTTCAAATTGAGTGCTCAGGTGATGGAGTCTGGTATGTTGAAGCATCTTCTCATTGCACACTTCACTCTCTTGATTTCTTTGATGATCTTCATTCTATTCCTTATCACGATCTTCTTCCTGATGCTGTTCCCGAGACCCAAGGCATCCAACCCCTCGTGCAAATGCAGGTGACACAATTTAGTTGCGGGGGTTTTGTGATAGGCCTCGTATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAGTAGGGGAACTAGCTAGGGATCTTGAGAAACCTAGCATTGAACCAGTGTGGCACAGGAACTTCTTTCCACCTTCTCAAACCCCCCAAAAAACTGCATTACCATCAACACCACTCGCTCCTCCTCAAATGCCAGACTACAAACTACAGCATGCTAACATAGACATGCCCCTGGATCAAATCAACCGTCTAAAAAGAGAATTTCAACAAGTGACTGGACTCAATTGCTCGACCTTCGAGATTGTTGCAGCAGCATGCTGGACCAGTCGAACAAGAGCCATTCGATTCGAGCCAAATACGGAACTGAAGCTAGTTTTCTTTGCAAATTGCCGTCAACTGTTGGACCCAGCTCTGCCCAATGGCTTCTACGGCAATTGTTTCTTCCCAGTGACGATCACGGCTTCGTGTGAGTCACTTAGAAATGCAACAACGGTTGGTGTGGTGAAGCTGATACAAGAAGCGAAGGCCAAGTTAGGCGTGGAATTTGACAAATACTTGAAGGGCGAGCATTTGAATAATGGAGAAGACCCTTTTGCGCCTCCACTCACCTACACCACTATGTTCGTATCTGAATGGGGAAGGCTCGGATTCAACCACGTGGACTACCAGTGGGGCCCACCCGTCCACGTGGTTCCCATCCAAGGGTCTAGCATTATACCAGTTGCCATTGTGGGGTCCATGCCTCTTCCCAAGAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCGTTTCTTTCCTCCATGAGATGGATGGGGTGATGAACGAGGGACTGAGTATGTAA 1290 0.4791 MELCVIRRNRGLVKPGKETPLSTLDLSVIDRLPVLRCNAQTLHVFKHGPQATRVIKEALSKALVPYYPLAGRLKESQIGCLQIECSGDGVWYVEASSHCTLHSLDFFDDLHSIPYHDLLPDAVPETQGIQPLVQMQVTQFSCGGFVIGLVFCHSICDGLGAAQFLNAVGELARDLEKPSIEPVWHRNFFPPSQTPQKTALPSTPLAPPQMPDYKLQHANIDMPLDQINRLKREFQQVTGLNCSTFEIVAAACWTSRTRAIRFEPNTELKLVFFANCRQLLDPALPNGFYGNCFFPVTITASCESLRNATTVGVVKLIQEAKAKLGVEFDKYLKGEHLNNGEDPFAPPLTYTTMFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPKKGIRLMTWCVEEAHRVSFLHEMDGVMNEGLSM 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02778 429 Gene3D - 199 415 IPR023213 -
Vian2g02778 429 Gene3D - 3 198 IPR023213 -
Vian2g02778 429 PANTHER ACYL TRANSFERASE 4 5 421 - -
Vian2g02778 429 Pfam Transferase family 8 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02778 Vian-Chr2 48736639 48738996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02778 8 385 Monolignol Biosynthesis Gene Families AT5G48930 29.136 7.46e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02778 - - gmx:100783128 721.079