Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02777 ATGTCTGATATGATGAGGCAGGGGAATGCTTTGCATGATGAAGAGCTTAAACATGATGAGAGAACGGCACCAGAGAGCACCACAAACGGGGAAAAGAAAGAAAAGAGACAACAAAAGCAAAAGGATGAAAGGGTTCCATATCACAGGCTGTTCTTATTTGCAGACTCCACTGACATCATTTTGATGGTTGTTGGCACCATTGGAGCCATTGGAAATGGCCTTGGGATGCCTCTCATGGCTTTTATTTTCGGGGAACTCATTGATAGCTTTGGCAATAACCAGTTTGGCCCCAACGTTGTCAAACAAGTTTCCAAGGTCTGCCTGAAATTTGTGTACTTAGGAATAGGCACTGGTATAGCTGCTTTCCTCCGGGAAAGACAGGCTGCAAGGATAAGGGGCTTGTATTTGAAAGCTATACTAAGACAGGATATTGCTTTCTTTGACAAGGAAACTAACACTGGAGAGGTGATAGGGAGGATGTCAGGTGACACTGTTCTCATCCAAGATGCTATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTAGTAGCAACCTTTTTAGGGGGATTTGTGATTGCATTTATCAAAGGATGGCTTCTAACTGTTGTCATGTCATCCGTCGTTCCACTTGTTGCTGCTGCTGCCGCTTCTATGGCCCTTATCATAGGAATGATGGCAAGCCGAGGCCAAAACGCGTATGCGAAAGCTTCACAAGTAGTTGAAGAAACAATAGGTTCAATAAGAACTGTTGCATCCTTTACAGGGGAAAAGCAAGCAGTGTCTACTTACAAGAAATTTCTTGCTGACGCTTATAAATCAGGAGTTCATGAAGGTTTAGTAAGTGGAGTGGGTTTCGGCATGGTTTTGTTCGTTATGTTCTGCGGTTATGGTTTGTCTGTATGGTTTGGCGCAAAGATGATAATGGAAAGAGGATATGGTGCGGGTGCGGTGGTCAATGTGTTTGTTGCTGTGTTAAATGCTTCCATGTCTCTGGGTCAGGCATCTCCTTCTATGAACGCTTTTGCTGAAGGTCAAGCGGCAGCTTATAAAATGTTTCAGACAATTGAGAGAAAGCCAGTGATAGATGCTTATGACCCAAATGGAAAAAACCTAGAGGATATTCATGGTGAAATCCATTTGAGGAATGTTTATTTCAGCTATCCAGCCAGACCTGAGGAGTTGATATTCAATGGATTCTCTCTTCATATAGCTAGTGGCACTACGGCAGCTTTAGTAGGACAAAGTGGAAGTGGGAAATCTACAGTTATCAGTTTAATTGAAAGATTCTACGATCCACAGGCTGGTGAAGTTCTTATCGATGGCACTAATGTGAAAGAATTTGAGCTCAGGTGGATCAGAGGAAAAATTGGCCTTGTCAGTCAGGAGCCAGTGTTATTTGCATCTAGCATTAAGGATAATATTGCGTATGGAAAAGATGGAGCAACAGTTGAAGAGATAAGAGGTGCAGCTGAACTTGCAAATGCTGCTAAATTCATTGACAAACTGCCACAGGGATTGGACACAATGGTTGGTGAGAATGGAACTCAATTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCCAGAGCAATCCTAAAAGATCCAAGAATTTTACTTTTAGATGAAGCAACAAGTGCACTTGACGCAGAGTCAGAAAGAATAGTGCAAGAAGCTCTAGACAGGATTATGGTCAACAGAACTACTGTCATTGTCGCACATCGCCTGAGCACGGTGAGAAATGCTGATATGATTGCAGTAATTCATAGAGGGAAAATGATTGAAAAAGGAAGACACGAAGAATTAACCAAGGATCCTGAGGGAGCATACTCTCAACTGATACGTTTACAAGAAGGAAACCAGGCATCAGAAGAAACAATAGACAGCCAAAACAAGAGGGAAATTTCCTCAGAATCCTTTAAAAAGTTGAGTCAAAGGCTGTCATTTCGAAGATCAGGATCATCTGTGGGGAACAGTAGCCGCCACTCTTTTTCATTTTCATTTGGTTTGCCTACAGCAATTAGCATCCCTGATCCTGACCTTGAAAACTCACAGCCTCGAGAAAAATCGCCAGAAATTTCACTCTGGCGCCTTGCTTCCCTCAATAAGTTAGAGATTCCAGTGCTTCTGAATGGATGTGTAGCTGCAATAGCAAATGGTGTTATATATCCAATATTTGGCGTATTGCTCTCCAGAATTATCAAAACATTTTTTAAACCTTTTCCTGAGATGAAAAGTGATTCCAAGTTTTGGGCAGTCATGTTTGTGATCCTTGGAATTGCATCTTTAATAGCAATTCCAGCCAGAAGTTACTTTTTCTCTGTGGCGGGCAGTAAGTTAATCCGACGAATCAGGCTCATTTGTTTTGAGAAGGTGATAAACATGGAAGTTGGGTGGTTTGATGAGCCTGAGAACTCTAGTGGTGCAATTGGTGCAAGGCTCTCAGCAGATGCTGCATCAGTGCGAGCCCTTGTTGGTGATGCTCTAGGACTATTGGTTCAAAATATAGCGACAGCATTGACAGGTTTGATTATTGCTTTCATTGCGAGCTGGCAATTGGCGTTTATTGTTCTTGTTTTGGTTCCCCTTTTTGGAATGAATGGCTATATCCAAATGAAATTCATGAAGGGATCCAGCACAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAACGATGCAGTTGGAAGCATACGAACAGTAGCTTCTTTCTGTGCAGAGGAGAAAGTTATGGAACTATACAGGAAAAAATGTGAAGTTCCCATGAAAGCAGGGATTAGACAAGGCTTGATAAGTGGAACAAGTTATGGTCTTTCATTTTTCTTGTTCTTCAGTGTCTATGCAACCAATTTTTATGCTGGAGCCAGACTTGTGGAAGCTGGCAAGGCATCATTCACAGATGTTTTTCTGGTTTTCTTTGCTTTAACTATGTCATCTGTTGGAATTTCCCAATCAAGCTCCCTTGCTCCTGATTCTAACAAAGCCAAGATAGCAACTGCTTCCATATTTAGAATAATTGACAGGAAATCGAAGATAGACCCTAGTGATGAAGTCGGTAGCACACTGGATAGTGTAAAAGGAGAAATACAGATTCGTCATGTAAGCTTTAGGTATCCATCAAGGCCAGATATACAAATTTTTCGAGACTTAAACTTGACCATCCATTCGGGCAAGACTTTGGCCATTGTTGGTGAAAGTGGGAGTGGAAAATCCACGGTGATTGCCTTGTTACAGAGATTTTATGATCCTGATTCTGGTCAAATTACAATTGATGGGGTAGAAATTCAGAATTTAAAACTCAAGTGGTTAAGGCAGCAGATGGGACTTGTAAGCCAAGAGCCAGTCTTGTTCAATGCCACCATCCGTGACAATGTCGCATATGGAAAGGAAGGCAATGCTAATGAAGCAGAAGTCATAACCGCTGCCAAATTGGCCAATGCACATGGCTTTGTTAGTGGCTTACAACAGGGTTATGATACAGTAGTGGGAGAAAGGGGAATCCAACTGTCTGGTGGGCAGAAGCAAAGGGTGGCCATTGCACGTGCTATAATTAAAAGTCCAAAGATTCTGCTACTTGATGAGGCCACAAGTGCACTGGACGCTGAGTCAGAGAGAGTTGTTCAAGATGCCTTAGATAAAGTGATGGTGAGCAGGACCACTGTGGTTGTGGCTCATCGTTTATCTACAATAAAAAATGCAGATGTGATTGCAGTGGTTAAAAATGGCGTTATAGTGGAAAAAGGAAGGCATGAAACACTACTTAATATCAAGGATGGGTTTTATGCTTCCTTGGTCCAACTTCATACAAGTTCTACTACACCATGA 3825 0.4227 MSDMMRQGNALHDEELKHDERTAPESTTNGEKKEKRQQKQKDERVPYHRLFLFADSTDIILMVVGTIGAIGNGLGMPLMAFIFGELIDSFGNNQFGPNVVKQVSKVCLKFVYLGIGTGIAAFLRERQAARIRGLYLKAILRQDIAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGRFLQLVATFLGGFVIAFIKGWLLTVVMSSVVPLVAAAAASMALIIGMMASRGQNAYAKASQVVEETIGSIRTVASFTGEKQAVSTYKKFLADAYKSGVHEGLVSGVGFGMVLFVMFCGYGLSVWFGAKMIMERGYGAGAVVNVFVAVLNASMSLGQASPSMNAFAEGQAAAYKMFQTIERKPVIDAYDPNGKNLEDIHGEIHLRNVYFSYPARPEELIFNGFSLHIASGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNVKEFELRWIRGKIGLVSQEPVLFASSIKDNIAYGKDGATVEEIRGAAELANAAKFIDKLPQGLDTMVGENGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMIEKGRHEELTKDPEGAYSQLIRLQEGNQASEETIDSQNKREISSESFKKLSQRLSFRRSGSSVGNSSRHSFSFSFGLPTAISIPDPDLENSQPREKSPEISLWRLASLNKLEIPVLLNGCVAAIANGVIYPIFGVLLSRIIKTFFKPFPEMKSDSKFWAVMFVILGIASLIAIPARSYFFSVAGSKLIRRIRLICFEKVINMEVGWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNIATALTGLIIAFIASWQLAFIVLVLVPLFGMNGYIQMKFMKGSSTDAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEVPMKAGIRQGLISGTSYGLSFFLFFSVYATNFYAGARLVEAGKASFTDVFLVFFALTMSSVGISQSSSLAPDSNKAKIATASIFRIIDRKSKIDPSDEVGSTLDSVKGEIQIRHVSFRYPSRPDIQIFRDLNLTIHSGKTLAIVGESGSGKSTVIALLQRFYDPDSGQITIDGVEIQNLKLKWLRQQMGLVSQEPVLFNATIRDNVAYGKEGNANEAEVITAAKLANAHGFVSGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLLNIKDGFYASLVQLHTSSTTP 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02777 1274 CDD ABC_MTABC3_MDL1_MDL2 1029 1267 - -
Vian2g02777 1274 CDD ABC_MTABC3_MDL1_MDL2 377 615 - -
Vian2g02777 1274 FunFam ABC transporter B family member 1 1019 1269 - -
Vian2g02777 1274 Gene3D - 1019 1273 IPR027417 -
Vian2g02777 1274 CDD ABC_6TM_Pgp_ABCB1_D2_like 697 1012 - -
Vian2g02777 1274 Pfam ABC transporter transmembrane region 708 979 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian2g02777 1274 Pfam ABC transporter transmembrane region 63 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian2g02777 1274 CDD ABC_6TM_Pgp_ABCB1_D1_like 62 350 - -
Vian2g02777 1274 Gene3D - 375 632 IPR027417 -
Vian2g02777 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 613 IPR003439 GO:0005524
Vian2g02777 1274 SUPERFAMILY ABC transporter transmembrane region 48 361 IPR036640 GO:0005524|GO:0016020
Vian2g02777 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 63 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian2g02777 1274 MobiDBLite consensus disorder prediction 8 42 - -
Vian2g02777 1274 FunFam ABC transporter B family member 9 49 373 - -
Vian2g02777 1274 Gene3D ABC transporter type 1, transmembrane domain 125 1003 IPR036640 GO:0005524|GO:0016020
Vian2g02777 1274 Gene3D ABC transporter type 1, transmembrane domain 13 94 IPR036640 GO:0005524|GO:0016020
Vian2g02777 1274 ProSitePatterns ABC transporters family signature. 516 530 IPR017871 GO:0005524|GO:0016887
Vian2g02777 1274 FunFam ABC transporter B family member 9 996 1017 - -
Vian2g02777 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 710 994 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian2g02777 1274 ProSitePatterns ABC transporters family signature. 1169 1183 IPR017871 GO:0005524|GO:0016887
Vian2g02777 1274 MobiDBLite consensus disorder prediction 1 42 - -
Vian2g02777 1274 PANTHER ABC TRANSPORTER B FAMILY 25 621 IPR039421 -
Vian2g02777 1274 FunFam ABC transporter B family member 1 367 616 - -
Vian2g02777 1274 Pfam ABC transporter 1048 1197 IPR003439 GO:0005524
Vian2g02777 1274 SUPERFAMILY ABC transporter transmembrane region 694 1013 IPR036640 GO:0005524|GO:0016020
Vian2g02777 1274 SMART AAA_5 404 596 IPR003593 GO:0016887
Vian2g02777 1274 SMART AAA_5 1056 1249 IPR003593 GO:0016887
Vian2g02777 1274 FunFam ABC transporter B family member 1 687 995 - -
Vian2g02777 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1267 IPR027417 -
Vian2g02777 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1029 1266 IPR003439 GO:0005524
Vian2g02777 1274 Pfam ABC transporter 396 544 IPR003439 GO:0005524
Vian2g02777 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 615 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02777 Vian-Chr2 48724364 48729578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02777 45 1273 Calmodulin-binding Proteins AT2G36910 43.885 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02777 K05658 - gmx:100802547 2143.62