Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02772 ATGGAGAACCGACACCACCGTGAATTGACCTTTTTAAGCTCCGGCGGCGACTTCCTCAATCCCCCTTTCGATCACACAACCCGCAACACCGATCCTCCCATCAAAGAAATGGACTTCTTCTCATCATCACCTTCATCTCCGGCTACTCATAAAGCCAACAACACCAATCATATCAACCATGTTGGACTTCAAGATGACACTCATCGACAAGGATCACCACCACACGTCTCTCATCACCCTGTAAACACCGGACTGAATTTAACTTGTGCAAGTACTGGACTCACAAAAGAAGAAAATGGTGAAAATCATGAAGCTGAGCTGAGTTCCATTGAAAGTCAATTGCGGAGACTACAGGAAGAGAATCGTAAGTTGAGAACGGTGCTGGACCAGATTACTAGAAGCTACACCCAACTACAAGCTCAGTTATTCATCACTCTGCAGAAACAAAAGCTTCCTCAGTTAAAATTCATCGTGAAACAGAATACGGAGGCAAATGGGATGGTGTCGGAACAAAAAAATGTGGACCCAGCTGGAGTATGCAGGAAGTTAGAGGTGGTAAATGAAGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGTCGCTCAAACAACGTTGAGGTATTGTCAAAGACAGATGATGATGAGGCTCCTCAATTCATTAAACTGAACCTTGGAAAACAGGCTTGTCCCGATGCTGCAGAAGATGTTCTTGACCGGTCCTCCTCACAGAGCTGGGGCTCATCCAAGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTTCTGCAGATCAGATTCCTCTCAGGAAAGCCAGGGTTTCCGTACGAGCTAGATCAGAAGCTCCACTGATCAGTGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCAAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGTACTATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGTAGAAGACAAGACCGTGTTGATAACAACCTACGAAGGCAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACATCAGCAGCCGCCGCCATGCTCTTGTCAGGTTCAACAGCCAGCAAAGAAGCACTCACAAACTCTGCAGGATATTACTCTTCACTTCCCTACGCTTCAATGGCAACCCTATCCGCTTCAGCACCATTCCCGACCATTACTCTCGACTTGACCCAAAACCCCAACGCCATGCACCTCCACCGCGTACCACCCCATGCTACTACGTTCCCTCTCCCACTGCATGCTTCCGGTGGTCACCAACTTCTAGGCCACCCCTTGTTCTTCTCACAGAAGCTTCCACCTGCAGCATCGCCCCTACTTCATGCTCGACAAACTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCCGATCCAAACTTCACTTCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAATACCTAGTAACAACAACGGAACTACTGGTGCCATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAG 1557 0.483 MENRHHRELTFLSSGGDFLNPPFDHTTRNTDPPIKEMDFFSSSPSSPATHKANNTNHINHVGLQDDTHRQGSPPHVSHHPVNTGLNLTCASTGLTKEENGENHEAELSSIESQLRRLQEENRKLRTVLDQITRSYTQLQAQLFITLQKQKLPQLKFIVKQNTEANGMVSEQKNVDPAGVCRKLEVVNEASVCDEKTDGEVSVCRSNNVEVLSKTDDDEAPQFIKLNLGKQACPDAAEDVLDRSSSQSWGSSKLEEQPKTAEQVSADQIPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCVEDKTVLITTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTASKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNPNAMHLHRVPPHATTFPLPLHASGGHQLLGHPLFFSQKLPPAASPLLHARQTSSMVETVSAAIASDPNFTSALAAAISSIIGIPSNNNGTTGAIGSPQLPQSCTTFSTN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02772 518 MobiDBLite consensus disorder prediction 243 266 - -
Vian2g02772 518 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 494 IPR044810 GO:0003700
Vian2g02772 518 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g02772 518 SUPERFAMILY WRKY DNA-binding domain 279 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian2g02772 518 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g02772 518 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g02772 518 MobiDBLite consensus disorder prediction 1 23 - -
Vian2g02772 518 Gene3D WRKY domain 271 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian2g02772 518 FunFam probable WRKY transcription factor 31 271 348 - -
Vian2g02772 518 Coils Coil 100 141 - -
Vian2g02772 518 MobiDBLite consensus disorder prediction 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02772 Vian-Chr2 48677514 48682319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02772 93 490 WRKY Transcription Factor Family AT4G04450 43.437 2.81e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian2g02772 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02772 - - gmx:100817839 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02772 2 48677514 48682319 Vian3g01535 3 16752575 16755193 PCT