Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02766 ATGGCTGTGCCAAGGATGGAGACGGTGTTCGTCAATGAAATCTGGCTCAGTGCCACTCCTGCTGACCTTTCACCTACACCTACACACAAGTTCAATTCAAGAACCCATCAGTTAATTGGAAAGGTTCACCCCTTTGGTGGGGTGAGAAGCTACCAAAAACTACAAATGGGAAGGCATTCCTGCTGTTACAAGCAGAAACTTAGGAAGGGTCTGTGGTCACCAGAAGAGGATGAAAAACTTCTAAGGCATATCACTAAGCATGGTCATGGTTGTTGGAGCTCGGTTCCTAAGCAAGCAGCACAATTACCTGGGAGGACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCCTTAAGAAGAAACTGAGGCAAAGAGGTATAAACCCTGTGACACATAAGCCACTGTCAGAGGTTGAGAATGTTGAGGAGGAGAAAACAACGAGCCAAGAATTATCCAACGAATTGAACCTCTTGAATTCTGAGAGCTTCAAGTCAGATGAAGGGTCCTTTGAGCAGAGAGCATCTTCGATTGCCCCCAAAGCCTATGAGATGGAAGGTTCCTGCAGCTCCAAGATTAACACCAAAAACGACACCAACTTGATAGCCAATTGTTCCAACAAAGACTTGTTCCTAGACAGCTACACCACTAGTTGTCAACCCTCAGATTTGATGGGAAATTACCCTCTTCAGATGACTGACACTCTCCCAACCAATTCAGACTCCAACCATTGGTTCAGTCCAACTGCAAGACCCATTGATATAAACTCTGAGTTTACTTCCAATGTTATGTCCATTCTTCCACCTACAACAACCTCATTTCTCCCTAGCACTTCTTTTTGCTACAAGCCATCACTTGCAGTCCCCCCAGAAGATATTTCAGCACCTTCGTTCGCTTTGAATGGACCCAATTACTGGGAACCCAGTGCCTCCAACAACAGCAATGGCAGCAACACAAGTGATGGCAGCAGAGAGTTCACAAGTAGCAAGAACAGTGTTCTTTCTTCGTGGGGACTGACAGAAGAAGCCAAGTGGTCTGAGTACCTCCATAACCCAATGCTGATGCTGGCAGCTCCTGAATCATTGTGCAACCAAATTAGGCCAGCCACACATTTGGTACCTGATAACACTTTAGGGTCCATAATTTCTGGTTCCAAGGAGCAACACCAGTCACAAACTTCTGCCATCTTTTCCAAGGACATCCAAAAGCTAACAGCAGCGTTTGGACATATATAA 1233 0.4517 MAVPRMETVFVNEIWLSATPADLSPTPTHKFNSRTHQLIGKVHPFGGVRSYQKLQMGRHSCCYKQKLRKGLWSPEEDEKLLRHITKHGHGCWSSVPKQAAQLPGRTDNEIKNLWNSCLKKKLRQRGINPVTHKPLSEVENVEEEKTTSQELSNELNLLNSESFKSDEGSFEQRASSIAPKAYEMEGSCSSKINTKNDTNLIANCSNKDLFLDSYTTSCQPSDLMGNYPLQMTDTLPTNSDSNHWFSPTARPIDINSEFTSNVMSILPPTTTSFLPSTSFCYKPSLAVPPEDISAPSFALNGPNYWEPSASNNSNGSNTSDGSREFTSSKNSVLSSWGLTEEAKWSEYLHNPMLMLAAPESLCNQIRPATHLVPDNTLGSIISGSKEQHQSQTSAIFSKDIQKLTAAFGHI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02766 410 SUPERFAMILY Homeodomain-like 62 127 IPR009057 -
Vian2g02766 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 122 IPR017930 -
Vian2g02766 410 Coils Coil 141 161 - -
Vian2g02766 410 Pfam Myb-like DNA-binding domain 69 117 IPR001005 -
Vian2g02766 410 PANTHER MYB DOMAIN PROTEIN 55 56 99 - -
Vian2g02766 410 SMART sant 68 120 IPR001005 -
Vian2g02766 410 CDD SANT 72 115 IPR001005 -
Vian2g02766 410 MobiDBLite consensus disorder prediction 308 328 - -
Vian2g02766 410 Gene3D - 66 124 - -
Vian2g02766 410 ProSiteProfiles Myb-like domain profile. 64 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02766 Vian-Chr2 48607272 48615078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02766 56 409 MYB Transcription Factor Family AT1G09540 33.491 2.21e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian2g02766 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02766 K09422 - gmx:100037467 525.783