Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02764 ATGATAATGAGGGTGCTCCTTCTTATAGTATTTACATTTTTTTCTGTGGTTATCAATGGTAGATCTGAGTATGAGCTTTTCTACCAAAACGACACCGGATCAATGGCTGCGAAGCCTCTCATGGTTCCTCTCACTCTTATTCCGGGAGCTGCTTCCAAAGGAGCTGTTTGTTTAGATGGAACATTGCCTGGTTATCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGTGGAGGATGGTGTAATAACATCAGAAGTTGTGTCTTCAGAAAAACTACTCGTCGTGGTTCCTCAAAATTCATGGAAAAGCAACTAGCATTCACAGGGATATTAAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAGACGAGGCTGCACAGCTTCAATTCCGAGGACAAAAAATCTGGCAAGCTGCAATGGAGGAATTATTGTCAAAGGGGATGAAGAAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCTGGTGGTCTAGCGTCTATAATACATTGTGATGAGTTCCGGACCTTATTTCCTACATCCACCAAAGTGAAATGTTTGAGCGATGCAGGGTTTTTCCTAGATGCGGTTGATGTTGCTGGGGTTCGGACAATGAGGAATCTGTTTGGAGGTGTAGTTAAGTTACAGGAAGTGCAAAAAAATCTTCCAGAAAGTTGTCTCAAGCAATTGGACCCAACTTCGTGCTTTTTTCCTCAAAATTTGATCAACCATGTTCAGACTCCATTGTTTCTACTCAATGCAGCTTATGATTCATGGCAGGTTCAAGACAGTTTGGTCTCTGGTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAACATAATCGTGCACTCTGTAACTCATCTCAAATTCAATTCTTCCAAGATTTCAGAAATCAAATGCTAAACTACATCAAAGGCTTCTCAGGGGAATCTCGTACTGGGTTATTCATCAATTCTTGTTTTGCTCATTGCCACTCTGAATTACAAGATACTTGGTTTGCTGATGACTCTCCAGTTATTGACAATACGCCAGTTGCAACTGCTGTTGGACAATGGTATTTTGATCGGAAAACTGTCAAAGCTATAGACTGTCCTTACCCCTGTGGCAAGACCTGCCATAATACGGTCTTCAAGTGA 1218 0.422 MIMRVLLLIVFTFFSVVINGRSEYELFYQNDTGSMAAKPLMVPLTLIPGAASKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNNIRSCVFRKTTRRGSSKFMEKQLAFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQDEAAQLQFRGQKIWQAAMEELLSKGMKKANQALLSGCSAGGLASIIHCDEFRTLFPTSTKVKCLSDAGFFLDAVDVAGVRTMRNLFGGVVKLQEVQKNLPESCLKQLDPTSCFFPQNLINHVQTPLFLLNAAYDSWQVQDSLVSGSADPHGSWNDCKHNRALCNSSQIQFFQDFRNQMLNYIKGFSGESRTGLFINSCFAHCHSELQDTWFADDSPVIDNTPVATAVGQWYFDRKTVKAIDCPYPCGKTCHNTVFK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02764 405 Pfam Pectinacetylesterase 36 385 IPR004963 GO:0016787
Vian2g02764 405 PANTHER NOTUM-RELATED 17 401 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02764 Vian-Chr2 48582571 48586748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02764 35 404 Carbohydrate Esterase AT3G62060 71.968 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02764 K19882 - gmx:100785270 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02764 2 48582571 48586748 Vian3g01529 3 16655137 16662921 PCT