Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02762 ATGGCGTCTTCATTATCAGCTCAATTTGTTCATTGTCAGAACTCACTTCCACGGGCTCAGGGTAATTTGAGCCGAGATGTGTCAAAGGTTCAAAGGCCACGTGTTGTCTGTTGCGTTACAGGGTCACGGCTTGGTTACGGTAAAACATTGGCATCTAGGTCACACTATGCCTTGAGGTTCCCTGTGAGGCAACAATCTGAAGCAAGGTCAATTAGATACAGGAGCATGACATGTGTCAGCGCCACAGACAATGCTCTAGAGCTTCAAGCCAAGGTGACAACCAAGTGTTTCTTTGACGTAGAAGTTGGGGGTGAGGCTGCTGGCAGGATTGTTTTGGGCCTATTTGGAGATGATGTTCCCAAAACAGCTGAAAATTTCCGTGCTTTGTGCACAGGCAAGCAATCAAGTTTTTCTGCAGCATTTTTCGTGTTGCCGTTGGATTTCTACTCTGAAATGGATTGTGGAACTGGTGGAATTAGTATCTATGGTCCAAGTTTTAAAGATGAGAGTTTTGCCTTGAAGCATACTGGTCCTGGAGTTCTAAGCATGGCAAATGCTGGTCCTAATACCAATGGTAGTCAATTTTTCATTTGCACTGTAAAGACTCAATGGCTAGACAATCGTCACGTTGTTTTTGGACAAGTCATTGATGGCATGGATGTTGTGAGGACACTTGAATCCCAGGAGACGAGTAAATTAGATGTCCCTCGGAAGCCTTGCAGAATTGTTAATTGCGGAGAACTTATAGATGGTTGA 756 0.4444 MASSLSAQFVHCQNSLPRAQGNLSRDVSKVQRPRVVCCVTGSRLGYGKTLASRSHYALRFPVRQQSEARSIRYRSMTCVSATDNALELQAKVTTKCFFDVEVGGEAAGRIVLGLFGDDVPKTAENFRALCTGKQSSFSAAFFVLPLDFYSEMDCGTGGISIYGPSFKDESFALKHTGPGVLSMANAGPNTNGSQFFICTVKTQWLDNRHVVFGQVIDGMDVVRTLESQETSKLDVPRKPCRIVNCGELIDG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02762 251 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 98 246 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 97 247 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 SUPERFAMILY Cyclophilin-like 88 248 IPR029000 -
Vian2g02762 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 194 206 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 207 222 IPR002130 GO:0000413|GO:0003755
Vian2g02762 251 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 88 248 - -
Vian2g02762 251 Gene3D - 82 250 IPR029000 -
Vian2g02762 251 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 95 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02762 Vian-Chr2 48569245 48571371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02762 108 250 U-box Gene Family AT5G67530 32.886 1.32e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02762 K03768 - gmx:100785805 372.089