Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02761 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAAAGTGGTGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGTTTAGGCCACTCTTTTTGTTACGTGAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCTTCAAACTCTGAGAGGTTCACTGTTGATTCTAGCACCCTTGATTCTGAGACATTGAGTGGTTCATTTAGGCATGAGAGCATCGAAGAGAGGCCTGGCAAGAATGTTCCGGAGACAACATTCAAGACAATATCAGGGGCTTCGGTCAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCTGCATCCTTTGAGGGAACCTCGTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGTTCTGGACCTTTGAATGGATTCATGTCGGGACCCTTGGAGAGATTTGCTTCCGGTCCCTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTAATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTCTCAGCCCCCCTTGCACGTGGTCGCCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTGAGTGGTCCAATGAGAAACACTTTTTCTCGGACTTTTTCCAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCTAAAGAGGCGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCGTCTGACTTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAACCTGATGTCCATAATAATGGAAATGATGTAGTTGCTCTAGAATCCGGTAGGGAGGAAATGTCTGATGCTCATAACATTTCAAATGAAGAAAGACCCTGCTGTACAGAAACTTCTTGTCCAGTAATGGTCAAGGATCAGCCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTGAGGTAAATGTTGAACAGAAAAATTGTGGAAGTCCCAGTATTGAGCATCCTGTTCCTGTATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTATAGTTCCTGCTGAAATAACACAAGAAAGGCAGTTGAGGTTCTGCTCATCTGGTGGTAAAGAGGATAGATCTGGACACCAGGATGAATGTCCTACTACTTCAGGGGAAAATGGACGCCCTGGGTTTAGTTCGACTAATCTGGAGCCTATAGCTCCCTTTTCTGTTTCAGGACAAAGACAGAATACAAGAAAGTCATTTATTGGTACAAAAATCAGAAAAATGTACAGGAAACAAAAGTCCTTACGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGAAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAGTGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAAGAAGAATACTTGAAAATGGTGGAGAATAGTATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTCTATGTTATGAACCTAGGAGATAGTCGAGCCATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATCCATGTCTCGTCAAAGATGACATGAGGCATAGGAATCGTTCTAGAGAGTCATTAGTAGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATTAATAAGCATGTTAACAAGATAAACAAAAATCGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACAGATCACAGCACAAGTATAGAAGAGGAAGTTTTAAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCTTGAAGAGGCCATGTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGAGTATGTGGGCAATGGTCCTTACCTAAGTTGCGCTTCGTCTGTTGTTCATCACCGGCTTTCTTCAAGTGATCGGTTCCTGGTGCTGTCCTCTGACGGCCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACCTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAACTTCTATTCCGTGCCGCAAAAAAGAACGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGTAAATATCATGATGATGTTTCTGTTATGGTGGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2664 0.4339 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEVGSSDLEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPDVHNNGNDVVALESGREEMSDAHNISNEERPCCTETSCPVMVKDQPSNSEIVEVNAEIEVNVEQKNCGSPSIEHPVPVSVPIGQLSGQGRRSVRLYELLQMESWNEQVSEQGKDSIVPAEITQERQLRFCSSGGKEDRSGHQDECPTTSGENGRPGFSSTNLEPIAPFSVSGQRQNTRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREETCFDKKLVKSSGPIRICKSGVDHSAVLRAMARALERTEEEYLKMVENSMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPCLVKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVLRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCFNEPLLKMFRVEYVGNGPYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02761 887 FunFam Protein phosphatase 2C 32 248 416 - -
Vian2g02761 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
Vian2g02761 887 Gene3D - 521 884 IPR036457 -
Vian2g02761 887 MobiDBLite consensus disorder prediction 492 523 - -
Vian2g02761 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Vian2g02761 887 PANTHER PROTEIN PHOSPHATASE 2C 273 877 IPR015655 GO:0004722|GO:0006470
Vian2g02761 887 Coils Coil 585 605 - -
Vian2g02761 887 Gene3D - 245 411 IPR036457 -
Vian2g02761 887 SMART PP2C_4 271 876 IPR001932 -
Vian2g02761 887 MobiDBLite consensus disorder prediction 477 491 - -
Vian2g02761 887 MobiDBLite consensus disorder prediction 477 523 - -
Vian2g02761 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Vian2g02761 887 Pfam Protein phosphatase 2C 600 647 IPR001932 -
Vian2g02761 887 CDD PP2Cc 580 878 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02761 Vian-Chr2 48553454 48558481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02761 1 887 PP2C-type Phosphatase Gene Family AT2G46920 64.000 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02761 - - gmx:100786856 1673.29