Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02745 ATGGCGAGAGTTTTCTGGACTGCCATTGCTATAGCACTAGTTTTCAGCAGCTGGGTTGATGGGTTCGAAGGTTATTATGAACATCAATTCAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTATCCTACGCCGGGAGTAATCTTCTGCTGGTAGGACTCACCCTTGTCCAAAATGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTACCCGGTTATCATTTGCACCGGGGATATGGATCAGGAGCAAATAGCTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAAGAGATATATTTTACTGGAATATTGAGTAATAAGGCTGAAGAAAATCCAGATTTTTTCAACTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGGGACAGTGAAGATGAGACTGCTGAACTGCAATTCAGAGGACAACGTATTTGGACAGCTGCTATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCGATCAGGCTCTTCTTTCGGGATGCTCCGCAGGTGGCTTAGCTACTATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCAATGACCACCAGAGTCAAATGTCTAAGCGATGCTGGGTTGTTTCTTGATGCGATTGACGTATCTGGCGGCCATACACTGAGGAACTTATACAGTGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTGCCTCAAATTTGTACTAATCACCTTGATCCCATCTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAAGACCCCGTTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCGCATGGCTATTGGCGTGATTGTAGATTAAATCATGCTAAATGTACTGCACCGCAAATCCAATATCTGCAAGGATTCAGGAATCACATGCTGAATGTTATCAAAGACTTCGCAAGAGCAAACCAGAATGGCTTGTTTATTAACTCGTGTTTTTCTCACTGCCAAACTGAGAGACAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAGGAACAAGGCTATTGCTCTGGCTGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAGGTTATTGATTGTCCTTACCCTTGTGATAATACGTGCCATCATCTGATTTTCAGATGA 1257 0.4256 MARVFWTAIAIALVFSSWVDGFEGYYEHQFNETELSLLEAHEASLSYAGSNLLLVGLTLVQNAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIYFTGILSNKAEENPDFFNWNRVKLRYCDGASFAGDSEDETAELQFRGQRIWTAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFRGLFPMTTRVKCLSDAGLFLDAIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWRDCRLNHAKCTAPQIQYLQGFRNHMLNVIKDFARANQNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLIFR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02745 418 Pfam Pectinacetylesterase 53 397 IPR004963 GO:0016787
Vian2g02745 418 PANTHER NOTUM-RELATED 41 414 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02745 Vian-Chr2 48388310 48394054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02745 1 418 Carbohydrate Esterase AT1G57590 66.903 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02745 K19882 - gmx:100782401 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02745 2 48388310 48394054 Vian3g01529 3 16655137 16662921 ECH
Vian2g02745 2 48388310 48394054 Vian2g02745 2 48388310 48394054 ECH
Vian3g01529 3 16655137 16662921 Vian2g02745 2 48388310 48394054 ECH
Vian1g00434 1 4011712 4016011 Vian2g02745 2 48388310 48394054 ECH
Vian2g02745 2 48388310 48394054 Vian3g01507 3 16448998 16453200 PCT