Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02743 ATGAACAACAACACTTGTGCAGCTGATCAATCTTATACTTCCAACAATGATTTGTTTGAGCTGGTTTGGGAAAAGGGCCAGATTTCAATGCAGGGTCAATCATTTAGAGCTCGAAAGAGCCCAAATTGTAGAACTTTGCCATCTCATTGCTTACCATCTCACACTCCTCTAGGAGGATATGCTAAGGATAATAATACTACCATCACAAGGATGGGGAAGTGTGGCAGTTTAGGACCTGAATTAAATGAAATCAAAAGGGTATTCCCTTCGGGTGAAGTGTATTTTGGTGAAGAAGAAGAAGATGAAGACATGGTGATGCCTTGGTTGAATTATGGAATGGATGACTCTTTGCAACATGGATATAGTTCTGAGTTTTTCAATGAACTATGCGGGGTCACCATGAATGAGCCGTCAGCATCAAATGGTTTTTCTTTGTTAGACAGAAGAAATAGTTGTAGTAAGGTATTTAGGGACACTCATAAAAACACTCCATTTGCATCTGTTAGATCCAAGATAGTGGATATAGCTGAAAATAATACAAATAATGTTCCATCTCCCTCAAGTGGTTTTTCTGGCTTAAAGATGGAGAAGCAAGGCTCAGTTGCGTGTAGCAATAGTTCCACCATGATGAATTTTTCCCACTTTGCAAAGCCTGTTGCTATTGTCAAAGCTAACCTTGAGAACATTGGTTTGGCATCAAGATCAGGAAGTGTGGGAATAAAGATAAAAGGTGTTGCTGCAACTGTTGCGACAAATCCTGCTGAATCAACAAAAGTTGAATTATTCGGAGAGTTTTCAAAAAAAGCAGGCACACAAAGTCATCAGGTTACGGAGCCAAAACCTCTTGAGCAGGATGGTGCCGTTTCAACGAAGTGTGATCCTTCTTGCAAAGATGTCTGCAGGATTGATGACACTTCAAACCTAGTCGTTGGAGAAAGTGTGAACAAAGGAAAGGAAGCTGTTGAAAAAAATGTAGAGCCAGCTGTAGTCTCCTCCTCTGTTTGCTCTGGCAATGGTGCAGAAAGGGGTTCTAAGGATCCAAATCAAAATTTGAAGAGAAAAAGTATAGACACCGACGACTTTGAGAGCCAAAGTGAAGATGTTGAGGAAGAATCAGTTGGTGTAGAAAAGGAGGTTCCTGCACCACAAATTGGAGCCAAGAGACACCGTTCAGCTGAAGTGCATAATCTATCTGAAAGGGTGTGCAAGACTATTTACTGTTTGTGTTCAGTTAATTAA 1239 0.406 MNNNTCAADQSYTSNNDLFELVWEKGQISMQGQSFRARKSPNCRTLPSHCLPSHTPLGGYAKDNNTTITRMGKCGSLGPELNEIKRVFPSGEVYFGEEEEDEDMVMPWLNYGMDDSLQHGYSSEFFNELCGVTMNEPSASNGFSLLDRRNSCSKVFRDTHKNTPFASVRSKIVDIAENNTNNVPSPSSGFSGLKMEKQGSVACSNSSTMMNFSHFAKPVAIVKANLENIGLASRSGSVGIKIKGVAATVATNPAESTKVELFGEFSKKAGTQSHQVTEPKPLEQDGAVSTKCDPSCKDVCRIDDTSNLVVGESVNKGKEAVEKNVEPAVVSSSVCSGNGAERGSKDPNQNLKRKSIDTDDFESQSEDVEEESVGVEKEVPAPQIGAKRHRSAEVHNLSERVCKTIYCLCSVN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02743 412 PANTHER TRANSCRIPTION FACTOR PIF3 3 400 IPR044273 GO:0003700|GO:0006355
Vian2g02743 412 MobiDBLite consensus disorder prediction 332 390 - -
Vian2g02743 412 MobiDBLite consensus disorder prediction 269 288 - -
Vian2g02743 412 MobiDBLite consensus disorder prediction 346 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02743 Vian-Chr2 48364116 48365549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02743 16 400 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 27.930 6.46e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02743 K12126 - gmx:102659557 541.962