Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g02740 | ATGGACTATCGATGGACTAATGGTAGGCTGGATACAGGTGGCCGTGACAGGAGGCAATCTAAAAGGGAACAGGCATATCAGGACTCTCTTGTTGAGGATTTGTCAGAAGACTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACACTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCACCGAGCCAATTAAATCTGGGATTAGAGATCCAAGACTTGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAATTGGAGGAGACAGAAGAACATGTGAAGAAGCGGGAGAAGGCTGCATATAGCATATATGCATGTCTTTTGACCGGATTGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTGGTAGTCGAGATGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAAAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACGCCTTCAATTGCAACAAGATTCTGGATCAGGAACAGTGTCCTCCGAATCTAGAACTGCTACTGCTCTTACAGATCAGGAGCAGAGAAATACTTTGAAATTTGGGTTTTCGTCTAAAGGCAGTGGTTCCAAGATAACTTTTGGTGCCAAGAAACAAAATGTTGCGAAGAAGCAAAGTGCCCCCCCGATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA | 960 | 0.4156 | MDYRWTNGRLDTGGRDRRQSKREQAYQDSLVEDLSEDFRLPINHRPTENVDLDNVEQASLDTHLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREKAAYSIYACLLTGLVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGGSRDDRQKREQQRQEKEMAKFAQIADAQKQQRLQLQQDSGSGTVSSESRTATALTDQEQRNTLKFGFSSKGSGSKITFGAKKQNVAKKQSAPPISSIFSNDSDEE | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g02740 | 319 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 1 | 319 | - | - | |
Vian2g02740 | 319 | ProSiteProfiles | G-patch domain profile. | 66 | 111 | IPR000467 | GO:0003676 | |
Vian2g02740 | 319 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 177 | 199 | IPR013087 | - | |
Vian2g02740 | 319 | Pfam | Zinc-finger double-stranded RNA-binding | 175 | 202 | IPR022755 | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 296 | 319 | - | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Vian2g02740 | 319 | Coils | Coil | 123 | 143 | - | - | |
Vian2g02740 | 319 | Coils | Coil | 313 | 319 | - | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 209 | 236 | - | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 9 | 24 | - | - | |
Vian2g02740 | 319 | Pfam | G-patch domain | 67 | 107 | IPR000467 | GO:0003676 | |
Vian2g02740 | 319 | SMART | G-patch_5 | 64 | 109 | IPR000467 | GO:0003676 | |
Vian2g02740 | 319 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 209 | IPR036236 | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 241 | 271 | - | - | |
Vian2g02740 | 319 | MobiDBLite | consensus disorder prediction | 209 | 271 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g02740 | Vian-Chr2 | 48334425 | 48337258 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g02740 | 1 | 319 | C2H2 Transcription Factor Family | AT5G26610 | 60.000 | 5.58e-118 | 340 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g02740 | - | - | gmx:100793206 | 523.087 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g02740 | 2 | 48334425 | 48337258 | Vian2g02740 | 2 | 48334425 | 48337258 | ECH |