Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02737 ATGGGCGGAGATGGAGCGACGGCCAACGCGGAGGCGCAGTACGCCTCTGCAAAGACATCGGTGTGGTGGGACATCGAAAACTGCCATGTGCCCAAGGGTTCGGATCCGCACGCGATCGCGCAGAACATCAGCTCCGCGCTGGTCCGCATGAATTACCGTGGCCCTGTCTCCATCTCCGCCTACGGAGACACCACGCGCATCCCACCCTCAGTACAACACGCGCTCTCCAGCACCGGAATTTCCCTCCACCACGTCCCTGCCGGCGTGAAAGACGCAAGTGACAAGAAGATTCTTGTTGACATGCTATTCTGGGCCGTGGATAATCCCGCACCCGCCAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGGTATAATATTCTTCTTGCGCAACCTCAGAAGGCATCAGCACCCTTGGTTGCTGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTAATGGTGAATCGCAACAACTTGGTAGTGGTAGCCTAAGCCATGTTTCATCTTCTGACTCCTTACAAGTTCCAGTTACAAGTACTGCTCAGATGCAGCAACAAGTAGAATCCTATTCAGAAGTTCATGCAGGAAATTCAAAATTTCCAAATGGAGGCAGGGGATTCGATACTAGGTTTCAGGGTAAACCTAATTGGAGAAGCCCGAGTCAATCAAATGCACCCAGAGCCGTGAATCCACCACCATCTGGACTTCAAGATAATCGTAATAATATAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGTTGAGTGGATCTGCTACAAATTATGTTCATGGCAACACTGATCAGTTATGGAGCAGTAATAGTAATCTACAGGGCAATCATCAAGTTCCTTATTCCCAGCCATTAAGACCAAATAACTTCCCATTGCAGCCTCCTTTTGCGCCTAGTAATTCATATACTCCAAATCCCCATACTTTTGCACCTCCAATGGTGCCACCTAGAACTGGTGGTCCCAATTTCAACTCAGGGCCACAAACCAATGTGCCAGATATTGGTAATCTAAACATTTCGGGATATCCTAATAGCGTTCATAACCCACCTACTATTCAACAACGGAATGGAGATTTGAAACAAAATCCTAATAGTAGTGCTCCACATGTTTTAAGATCAATTGATGAAAAAAATGGACATGTGGTACATAACAGTGGCACACAACAATTACGCCAAGGTTATCAACATGGTCCAGAATATCAACCAATGCTACCGGCAGCAATGGGTAATAATAATCCTCCTGGTAGTGGTATGTGGGGTACTCCAGGATGTCCTAAGCCTTCTGAATATGTACAAGGCCTAATAGGGGTTGTTTTACTTGCCTTGAACTCACTGAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGTTTTGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTTGTGAAACAGAATTTAGGTGCTTTGCCATTGTATGTTGGTAAGAATGATAAACTATGGAAATGCGTCAATCCTTTAGGTGGTAATCCTAAGCAGCGCTCAAAAGAAACATGGGATCAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGATCAGCAATAATGGCTACTCTGTGCAAGTACGAAGCAGGTATTGTGATTAAGAATATGTGCTTCAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTAATTACCCATAAAAAATGGATTGCACATCATCCGTCTGGTTGGCAACCACTTAGCATTGCTCTACCTGAGACAAACCCTGATTCAGGGGTTGTGGCTAGAGTATAA 1893 0.4496 MGGDGATANAEAQYASAKTSVWWDIENCHVPKGSDPHAIAQNISSALVRMNYRGPVSISAYGDTTRIPPSVQHALSSTGISLHHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGSGSLSHVSSSDSLQVPVTSTAQMQQQVESYSEVHAGNSKFPNGGRGFDTRFQGKPNWRSPSQSNAPRAVNPPPSGLQDNRNNINSYRPGNFNPNVPLSGSATNYVHGNTDQLWSSNSNLQGNHQVPYSQPLRPNNFPLQPPFAPSNSYTPNPHTFAPPMVPPRTGGPNFNSGPQTNVPDIGNLNISGYPNSVHNPPTIQQRNGDLKQNPNSSAPHVLRSIDEKNGHVVHNSGTQQLRQGYQHGPEYQPMLPAAMGNNNPPGSGMWGTPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRFGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQRSKETWDQIEKFLTTPAGRSAIMATLCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIAHHPSGWQPLSIALPETNPDSGVVARV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02737 630 Gene3D - 9 161 - -
Vian2g02737 630 CDD PIN_limkain_b1_N_like 18 142 - -
Vian2g02737 630 MobiDBLite consensus disorder prediction 232 278 - -
Vian2g02737 630 MobiDBLite consensus disorder prediction 170 278 - -
Vian2g02737 630 MobiDBLite consensus disorder prediction 170 214 - -
Vian2g02737 630 Pfam OST-HTH Associated domain 568 617 IPR025677 -
Vian2g02737 630 MobiDBLite consensus disorder prediction 364 394 - -
Vian2g02737 630 Pfam NYN domain 18 154 IPR021139 GO:0004540
Vian2g02737 630 PANTHER LIMKAIN B LKAP 13 510 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02737 Vian-Chr2 48312099 48315171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02737 8 267 C2H2 Transcription Factor Family AT5G61190 56.923 2.75e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02737 - - gmx:100794608 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02737 2 48312099 48315171 Vian2g02737 2 48312099 48315171 ECH