Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02713 ATGGTTTGCGAGGAAGAGTTGCTGATTGAAAAAGTCTGCGGGCTGTATGAACAAATCTCGAGCCTCGAGAGTCTGAAACCTTGCAAAAATGTCGACATGCTTTTCACCCAACTAGTCCTCACATGCATACCCCCTAGCCCAATAGATGTCACAAACCTAAACAAAAACGTGCAAGAGATTAGATCTCACCTTATAAAACTCTGTGGTGAAGCCGAAGGCCATTTAGAGACCCACTACTCAACCCTCCTAGGCTCATACGACAACCCTCTTCAAAACCTTCATATTTTTCCTTATTATTCAAACTACCTCAAACTCGGTCTCCTTGAGTTCACTATCCTCACCCAACACTGCACCCATGTCCCCAGCAAAATCGCCTTCGTGGGTTCTGGACCCCTCCCTCTCACCTCGATTGTGTTGGCATCAAACCACTTACCTTCCACCACATTTCACAACTATGACATGGACCCTTTAGCCAATTCCAACGCTATGCGCTTGGTTTCCTCTCACCCTGACTTGTCCAACCGCATGGTTTTTCACACCACTGACATATTGGATGTCTCCAACGCTTTGAAGGAGTACGAGGTTGTTTACTTGGCAGCCCTTGTGGGCATGGACAAGGAGAGCAAAAACCGCATCATCGATCACTTGGCCAAGCACATGAACCCTGGAGCACTTCTCATGCTAAGGAGCGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTCATTGAGCCTTGCGATCTTCGAGGTTTTGAGGTCCTCACCGTCTTCCACCCCACCGATGAGGTCATCAACTCGGTTGTCATCGCACGTAAATATCCTGTCCCTATGCACTCACTGGATCAAGGCCTTGCTTCCAAGATCCTTCCCAACAAATGTTCCGAGATTCAAGCCTTCAACCCCCTCAACCATGGGAACATGATCGAGGAATTTGCCATTGAGGAACAGCTCTAG 951 0.4837 MVCEEELLIEKVCGLYEQISSLESLKPCKNVDMLFTQLVLTCIPPSPIDVTNLNKNVQEIRSHLIKLCGEAEGHLETHYSTLLGSYDNPLQNLHIFPYYSNYLKLGLLEFTILTQHCTHVPSKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSHPDLSNRMVFHTTDILDVSNALKEYEVVYLAALVGMDKESKNRIIDHLAKHMNPGALLMLRSAHGARAFLYPVIEPCDLRGFEVLTVFHPTDEVINSVVIARKYPVPMHSLDQGLASKILPNKCSEIQAFNPLNHGNMIEEFAIEEQL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02713 316 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Vian2g02713 316 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Vian2g02713 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 232 IPR029063 -
Vian2g02713 316 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Vian2g02713 316 PANTHER NICOTIANAMINE SYNTHASE 3 4 312 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02713 Vian-Chr2 48007392 48008342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02713 1 313 Nicotianamine Synthase Gene Family AT5G04950 60.625 1.04e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02713 K05953 - gmx:100794250 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02713 2 48007392 48008342 Vian2g02713 2 48007392 48008342 ECH