Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02705 ATGGAGATGGAGAAAAGGCGTTCCAAGGGAAGCTTCCTAAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTTTGGAGCGATCCAGAGATTTCAAAGCAAGGGAAGGGAAATGTGGAGAACTTACACAAGTCGCAGCTCACTAGGATAAAGGTGGATGAAATTGGAGCAAGTCCAAGTAACATTCAAAGTTGTGATTTTGACAGTACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGGTCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCGTTGCCAGCTTCGGCTGTCACTGAGCCCTCCTGCACATCACTTTACGGCTCTACATCTCATGGAGTCTCTGACTATAATGAAGGTGCTCTTCGTTCAGTGGATGAGTTTTTCCCTGCAGACTACATAAATACACTGCTTAAGCTGGAAAAGTCTCAATTGGGTGCCATAGAGTCAAGGGCTAGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTACCTCCAAAGTCAGCTAAGTCCATTCCAGTTACTCATAATAAACTGCTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCACCAAAAAATGCTGCTCATGTAATGGAGGCAGCGGCTAAGATAATTGAGGCGAGCCCTCAGCCGTATTTGAGGAATAGAATATCTGCTGGGTCTTCTTCCGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTGGAAGCAGCACAATATACATCAGTGACTGGAAAACCTGCGAATATGAGCAAAACCTATCCTGCAAATGGCAAGCTTAGCGAGAGGAGTAGTAATTTATCCAAATGCACTTCAGCATTCAAGGGTTCAAGAGGTTCAGAAAAAAATAGTCCTTGCCATTTAGCCAGTAAAGGAAAACCAGTTTCACTTGCAATCCACGCCAAAAACAACGCTCATAGTAGAGATACATTGATTTCAAATGGTGACATGAAATGCATGAGAGAGAAAGAGAAGAATGGAATGAAGTCAAATCAGCATTTAAGGAGCCAGAAACCAAGTACGCAAAAAGCCATGCAGCAGAGACCTTGCTCAAGTCGGAATGGCAATGTGCTTGGGCAGAATAATCAAAAACAAAATAGCATGACTGCCAAGGGTAAATCAACTTCAAAATTAGATTCCAATAAGCCAACAACACGAGCTTCACCTTCAGAAACTTTTGGAATAAGGAAGACAACAAACAAGGGTGCTACAAATGCCAATGTTCATCCTAGAAGGTCAAGCATCAGGGCAACTGACATCCAAAAGGAGTTTCCACGATCCAAATCAGTAAGTACTTCGAGAAAGACAAAATATATCAGCAGTGATGTTCATGAGGCTGGAGGTCCTGATAATGCAGTAAATAATTTTGGAAGTAAGTCCATCAAATGCAATTTTACGACTGATGGAAGTTTTGGTCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTCACATCTCCCTTGAGGAGAAGTATGCCTGAGTCATCTTCCTCCACCGAGCAAGTCAACGGAACTAGAAATAGAATTGATGTAAACTCTCTTGCGCATAGTGATAATTTTCATCCCAAAAAACTGTCATTATCTCCACAAGGAAAACATATGATAGACAGTGATGCTCTAAGTATCCTGTTGGACAAAAAGTTACAAGAATTGACATCCAGAATTAACTTACCTCAATGTACCTTGGCCGCAGAGGGAAGTTCTTCTGGTTTGGGATCTAGTGTGCAAGACAACTTTCCCAGTGCAGCAAGCACCATGCCTAAGGAACAAGACAGAAGCCTTTTCTCTGACCTGTTTAGTGATAAACTGGACAGCATTCTTGACTCTCGTCCAAGTGATGATCCCGTGCTTAGCATGAATCAGCAACTTCAGAATTCTGAAGTAAATCAAGATCCTAGCTGTAGCAGCAATAGTGAAAGTGGAAATGATATAGTTTGTTGTCGCTCAACTTTTGTTGCGGGGTCTGAAACTCTTGTCAGCGAAAGTTACTTGGATAGTGAAGACAGCGCTTACGCCAGCACAATCTATTCTTCAATGCAAGACGAAGAAGCATCTAGTTTTTCCCAGATAAGCGAATCTGTATCACTTGAAAGTGAGGTGAAGGGACCAGAGCAAAGCCCTTCCATATCGGGGGATGGAAATATGACCGTCAAACAAATGAGTGGGATATCTAGTTCAGTTGATTTTAAAAGATCAAGTAACACAGAACTTGAATATGTACAGGATATTCTTGGTAATGCAAAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTGCAGTCATTATGCCAAATTTATTTGAACTGTTGGAGAATCAGAATAGTAGAACAGAAAACTACGGAGAAGAGTACTCTAAACTTGAAAGGAAGGCTATATTTGATTGTGTGAGCGAGTTCCTGGAGTTAAGATGTAAGCAAGCTTTCATTGGAACGTGCAAAGTGTGGCCTGGATGGATGATGGCAGTTCAGAGGAAGAAGTGGATGGCAGAGGAACTGTACAAGGAGATGCTGAATTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACAAAGGACATGAGCTCCGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATACTAGCTTATTTGATTAATGAATTAGTTTCAGATTTGTTACCAGTCTAA 2733 0.4146 MEMEKRRSKGSFLSLFDWNSKSRKKLVWSDPEISKQGKGNVENLHKSQLTRIKVDEIGASPSNIQSCDFDSTLSICSDEGCGSKGPGLVARLMGLDSLPASAVTEPSCTSLYGSTSHGVSDYNEGALRSVDEFFPADYINTLLKLEKSQLGAIESRARKVENLPIKRFQTEMLPPKSAKSIPVTHNKLLSPIKSPGFLPPKNAAHVMEAAAKIIEASPQPYLRNRISAGSSSVPLRILNLKERLEAAQYTSVTGKPANMSKTYPANGKLSERSSNLSKCTSAFKGSRGSEKNSPCHLASKGKPVSLAIHAKNNAHSRDTLISNGDMKCMREKEKNGMKSNQHLRSQKPSTQKAMQQRPCSSRNGNVLGQNNQKQNSMTAKGKSTSKLDSNKPTTRASPSETFGIRKTTNKGATNANVHPRRSSIRATDIQKEFPRSKSVSTSRKTKYISSDVHEAGGPDNAVNNFGSKSIKCNFTTDGSFGQDAFNMKESKDVISFTFTSPLRRSMPESSSSTEQVNGTRNRIDVNSLAHSDNFHPKKLSLSPQGKHMIDSDALSILLDKKLQELTSRINLPQCTLAAEGSSSGLGSSVQDNFPSAASTMPKEQDRSLFSDLFSDKLDSILDSRPSDDPVLSMNQQLQNSEVNQDPSCSSNSESGNDIVCCRSTFVAGSETLVSESYLDSEDSAYASTIYSSMQDEEASSFSQISESVSLESEVKGPEQSPSISGDGNMTVKQMSGISSSVDFKRSSNTELEYVQDILGNAKFMAEEFAMGQTSAVIMPNLFELLENQNSRTENYGEEYSKLERKAIFDCVSEFLELRCKQAFIGTCKVWPGWMMAVQRKKWMAEELYKEMLNFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02705 910 MobiDBLite consensus disorder prediction 709 729 - -
Vian2g02705 910 MobiDBLite consensus disorder prediction 334 421 - -
Vian2g02705 910 MobiDBLite consensus disorder prediction 341 421 - -
Vian2g02705 910 Coils Coil 785 805 - -
Vian2g02705 910 Pfam DUF761-associated sequence motif 77 102 IPR032795 -
Vian2g02705 910 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 906 - -
Vian2g02705 910 MobiDBLite consensus disorder prediction 580 604 - -
Vian2g02705 910 Pfam Domain of unknown function (DUF4378) 750 902 IPR025486 -
Vian2g02705 910 MobiDBLite consensus disorder prediction 279 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02705 Vian-Chr2 47947384 47951258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02705 3 908 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.397 3.36e-105 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02705 - - gmx:100804688 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02705 2 47947384 47951258 Vian2g02705 2 47947384 47951258 ECH