Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02704 ATGGCCTTGCCTTTCTGCATACGTGCCCTGAGAAATGTGATCAACGCACTGTGGCTGAATGACCACTCATCCTATTTAGAAACTTTTGTGCGAAGAGTGGTAAGGGAGGAGTTGGAAAAAAAAATCCAGGACCAGGCTCATCTATTTCCAAGAAAAAAGGTTAATGAGGCTGGAATATCCGGAGCCAAACGCTTTAAGTTGTGCTTTCTTAATAAGTTACCTAAGACAATCTATACTCGGTCTAATATAAAAGCAGAAGACGAATCAGTTCTTCAAATTGCTTTATTTGATGTTAGAACGAAGTCTGTAGTAGAGGAGGGTCCCCTTTCCTCGCTAAAGATAGAGATCTGTGTTCTGAATGGTGAGTTCGGATCTGATGGCAGTGAGGAGTGGACAGAAGAGGAGTTCAAGTCCAATATCTCACGTGAAAGAGAAGGTAGAGAGCCCCTTTTGATTGGAGAGAGGTTTATTACTCTTAAAAATGGAGCTGCTTGTATCACTAAAATTGCCATATCTGATAACTCGAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTTAAATGTGTGCCACCAACTTCCATTGGAGAAAAGATTCAGGAGGGTAGAAGTGAGCCTGTTATTGTTAAAGATAACAGGGGAGAGTGCTACAAGAAACACTTCCCTCCATTCTTGGATGACGAATTATGGCGTTTGAAGAAAATTGCCAAGGAAGGAAGAATCCAGAAGCAATTTTCTTTACATGGAATTCACACCGTGAAGGATCTCTTGCGGCAGTACATAACCAACGAAAAATCACTGTATAAAATGCTTGACCTTCCAAAGAAGTCATGGTTAGCGATCACTGACCATGCCAATACCTGTGTGATCGATGATTACAAGCTTTACGGCTATCACTCACAAGAACCGGAAATAGGCCTGCTATTCAATTCCGTCTACATCCTCGTGGGAGTGACATTTGATTGGCAAAATTATTATTCACCGGATATTCTCACTCCCCATGATAAGCATTGGGTGGAAATAGTGAAGCAGCAAGCTTACAAAAATGTCAACAATTTGAAAATGATTGATGAAACTAAATTGAACAGTTTAAACCTAGACGCATGTCTAAGAAAAGCAAGACAATCCGACACTCCAGATCAATGTCTGCAACACATGGATATCTCAACTGCACAAGGTCAAGCAGAAACATTCCCAGGTTGTAGTCAACCATCTATCTCTACTTCATATACTGATGAAGGAATGCATGACGGCCAAATTTATGCCGATCCACAGCCAGGCACGAGAGAAATGCCGCTTAACGGTTATGTGTTGGATGAATTTTCCTCTGAGATGTACAATGACGAGGATGGTTGTCACTTTGACGGATCGTGTTTACCATTCCCTGAAGGTGGATATTCGATAGAGAATGAAAGGTCAGATGTTGAATTCATATATGGTTGTCCTCCTTGGGCAACATGGGAACCAAAAAGTGGTATTTTCTTTGGTTCTTGCGATGGAGAAGAATGTAGCCGTTATTCTACTTTCACAAATTCTGCTGTGGACATATCAAGTAATGGCAAATCCAAAGCAGCGTGGTGTAAGATTGGTTTTGTTCTGAAATGGGTCATATCAGTAAAAAGGCACGCAACTGCCAAAAAGAATGCTCAGCTGTTTTGCCATAACTAA 1668 0.4131 MALPFCIRALRNVINALWLNDHSSYLETFVRRVVREELEKKIQDQAHLFPRKKVNEAGISGAKRFKLCFLNKLPKTIYTRSNIKAEDESVLQIALFDVRTKSVVEEGPLSSLKIEICVLNGEFGSDGSEEWTEEEFKSNISREREGREPLLIGERFITLKNGAACITKIAISDNSRWQRSRRFRIGVKCVPPTSIGEKIQEGRSEPVIVKDNRGECYKKHFPPFLDDELWRLKKIAKEGRIQKQFSLHGIHTVKDLLRQYITNEKSLYKMLDLPKKSWLAITDHANTCVIDDYKLYGYHSQEPEIGLLFNSVYILVGVTFDWQNYYSPDILTPHDKHWVEIVKQQAYKNVNNLKMIDETKLNSLNLDACLRKARQSDTPDQCLQHMDISTAQGQAETFPGCSQPSISTSYTDEGMHDGQIYADPQPGTREMPLNGYVLDEFSSEMYNDEDGCHFDGSCLPFPEGGYSIENERSDVEFIYGCPPWATWEPKSGIFFGSCDGEECSRYSTFTNSAVDISSNGKSKAAWCKIGFVLKWVISVKRHATAKKNAQLFCHN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02704 555 PANTHER OS02G0177800 PROTEIN 21 419 IPR012416 GO:0005516
Vian2g02704 555 Pfam Calmodulin binding protein-like N-terminal domain 65 212 IPR046831 -
Vian2g02704 555 Pfam Calmodulin binding protein C-terminal domain 294 354 IPR046829 -
Vian2g02704 555 Pfam Calmodulin binding protein central domain 225 288 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02704 Vian-Chr2 47931004 47935264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02704 24 351 Calmodulin-binding Proteins AT5G57580 38.757 6.77e-75 248