Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02703 ATGGCACCAAAAAGAACCTTTGACGAGGAGGATCATCACAATAACGACGACACCCATCTTCAAACTGTTGCTAAAAGAAGACGGGACGAGACCATCAATCATTCGCTTCTTGCCGCTTTGGAACCTGTTCTTCGCAAATTGATGGAGGAGTTGATTCCTCCTATGCTAGAGCGTCACGTGTCTCCGTGTTGTCGATTTTGCCATAACCATCAGGGTGGCAGTTCTGGAGGAAGAGCTTACCAATTGTGCTTCGTCAATGAATTGCCTAAAGTAATTTTCACCATGGCCAATCTCACAGCTGAGGACGGTGGTTCACTTGAAATTGAGCTGCGGGATGCTGCATCGCAGCAACGCCTTGACACAGAGGAATTTTCCAGCATGAAGGCTCAGATCTATGTGCTGGATGGTGCTTTTGAAAGTCAGGACTGGACTGCAGAGGAATTTGATGGCAACATTGTGAAACCAAGAGAGGGGAAGGCACCATTACTCAGAGGACACACGGTTATTAAAATTGAAAAAGGGGTTGGTTTTATCGATAAGAAGAGGCTTAAGATTACTGATAATTCTTGCACCACAAGAAGCAAAACGTTTCGGTTGGGAGTTAAAATCGTGGGATCTAACTCCCATGGAGTAGGAATCAGGGAAGCCATAAGCGAACCCTTCAGGGTCAAAGATAAACGTGGAGAGTTGGCCAGGAAATCCGAGCGTCCAGCCTTGAACGATGAAGTATGGCGTCTGAGGAACATTGGAAAAGCGGGTGAGCTTCGCAAGCAGCTTTCAAAGAATAAAATAAAGACTGTGAAGGATCTTTTGCGGCGGGACACAATCGGTTTATTACGGGAGAAATTCGGCAAGATTAATACATGGGACAAAATCATTGAACATGCTAAAGAATGTGAACTAGATGAATCTGAGCGCTACTTGTATACGTATCGTGCCATGGAACCAGAGAAATCTGTTTCCCTTGTCTTTAATTGCATCTATGAGCTTGTGGAGGTCATTATTAACGGCCAACATCGTTCTCTGAAATCTCTGAATTCGGAGGAGGAGCGTTTTGTGGGAAGAATGAAGGAGGAAGCATACTCAAATCTGGAGCATCTGGAGCCAATTGCTGCCACACCAACGACACATGACATAGTGTCGAAGTTAGCAGGTACACAGGCGGTGTCATACAGTGCTCCATATCAAGGTCTGCAACTGCCTGATCACCAAGGTCAATTGGAAACATCAACATCAATCGTAGATAGCTGGCCGGCGTTCTACGACGTATTTGAAACTTACTTTATTCCTAACCCTGACCAGTGGGAGCAACCAAATTTTTTCCCCTTACTATGTGGTGACAATGGAGCATCATGTAGCCAAGACAGCCCTTCCTTTTTGCCCAACACTGCTGAGTATATGGCAAGCAAAAGGAAAGCCAAGACGGTTTGGCAGAAAGTCAGAAATGCTTTCGAACTCCTCATACATCCGCATAGGGCTTAA 1482 0.4541 MAPKRTFDEEDHHNNDDTHLQTVAKRRRDETINHSLLAALEPVLRKLMEELIPPMLERHVSPCCRFCHNHQGGSSGGRAYQLCFVNELPKVIFTMANLTAEDGGSLEIELRDAASQQRLDTEEFSSMKAQIYVLDGAFESQDWTAEEFDGNIVKPREGKAPLLRGHTVIKIEKGVGFIDKKRLKITDNSCTTRSKTFRLGVKIVGSNSHGVGIREAISEPFRVKDKRGELARKSERPALNDEVWRLRNIGKAGELRKQLSKNKIKTVKDLLRRDTIGLLREKFGKINTWDKIIEHAKECELDESERYLYTYRAMEPEKSVSLVFNCIYELVEVIINGQHRSLKSLNSEEERFVGRMKEEAYSNLEHLEPIAATPTTHDIVSKLAGTQAVSYSAPYQGLQLPDHQGQLETSTSIVDSWPAFYDVFETYFIPNPDQWEQPNFFPLLCGDNGASCSQDSPSFLPNTAEYMASKRKAKTVWQKVRNAFELLIHPHRA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02703 493 Pfam Calmodulin binding protein C-terminal domain 308 369 IPR046829 -
Vian2g02703 493 PANTHER OS02G0177800 PROTEIN 32 441 IPR012416 GO:0005516
Vian2g02703 493 Pfam Calmodulin binding protein central domain 238 299 IPR046830 -
Vian2g02703 493 Pfam Calmodulin binding protein-like N-terminal domain 80 226 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02703 Vian-Chr2 47926973 47929334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02703 18 405 Calmodulin-binding Proteins AT5G26920 34.596 5.51e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02703 - - vra:106757360 831.247