Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02702 ATGGAATCAAAAAGACAATCCCAAGAGGAGGACAAAAGGGGTGATCAAAAGCGGAGTCGTCAGAATTCACAACTATCGGAAACATGGCGCATCACTCGAAGTTCTAGGTGTCTGCTTCTCAATCGGAATGAACTGATGCCCTACTTGGAAGATTCAATTCGAAATATAACACGAGAGGTGGTTGAACTCCAACTAGCAAGACTAATAAGTAGTACTCAGACTGAAATATCTGGAGGCCGCAGATTCTTGAAGCTGGTTTTTAGGAATGAATTGCCTGATACAATTTATACTATGTCCAAATTGAAAGCTAGAGACAACAATCCTCTTGAGGTCGCTCTTTTCGATGTTGAATCTCGGTTTATAGTCTCTGATGAGAATGATCCACTGTCTTCGATCAAGGTAAAGATTTGCGTCCTTAATGGTGAGTTTGCTTCAGATGGCAGTGAAAATTGGAGCAAAGATGAATTCAAATCCAAAATCTTACGTCAAAGAGAGAATAAAGGGCAGCTACTGAAAGGAGATACGGTTATTGCGCTTAAAAATGGAGTAGGTTTTATCCACAATGAATTCACTGACAACTCATTTTGGATAAGAACAGGACGTTTCAGATTAGGAGCGATGGTTGCAAAATCAAATATGAATGACGCATTAATCATCAGGGAAGGTATAAGTAAACCTTTTAGAGTCAAGGACTACAGAAGTAAGTTGAACAAGAAAAAGGATCCAACCCTCAGTGATGAAATATGGCATTTGAAACATATATCAAAAAAAGGGAAAATTTTTGAGCTGCTTTCTGAGGACGGGATACATACTGTTGGCGATTTTTTGAAGGAGCTTGAAACCAATCCATTATCTTTGGAAGAGAAACTCGGCAAGATTTCCTCCAAAACCCGGGAAGAAATTTATAAGCAGGCTAAGAAAGCAAAGCATGCTGAGAGTAATACTTTCAACTCCGATCAGACGGGGCAGCAAGCATGTGAAAGTTCGAGGGGTCTGTTGCAGATTGAGCTGATAAACGGTGCTCCAGATCAAGATGTTCAACTGCCTGACTTCCCTCAGCAAGACTGGATTGATGAATTATCACAGAACGATGAATTTGATCCATTCCACCTGACATAA 1119 0.4021 MESKRQSQEEDKRGDQKRSRQNSQLSETWRITRSSRCLLLNRNELMPYLEDSIRNITREVVELQLARLISSTQTEISGGRRFLKLVFRNELPDTIYTMSKLKARDNNPLEVALFDVESRFIVSDENDPLSSIKVKICVLNGEFASDGSENWSKDEFKSKILRQRENKGQLLKGDTVIALKNGVGFIHNEFTDNSFWIRTGRFRLGAMVAKSNMNDALIIREGISKPFRVKDYRSKLNKKKDPTLSDEIWHLKHISKKGKIFELLSEDGIHTVGDFLKELETNPLSLEEKLGKISSKTREEIYKQAKKAKHAESNTFNSDQTGQQACESSRGLLQIELINGAPDQDVQLPDFPQQDWIDELSQNDEFDPFHLT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02702 372 PANTHER OS02G0177800 PROTEIN 4 312 IPR012416 GO:0005516
Vian2g02702 372 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g02702 372 Pfam Calmodulin binding protein-like N-terminal domain 83 231 IPR046831 -
Vian2g02702 372 MobiDBLite consensus disorder prediction 1 27 - -
Vian2g02702 372 Pfam Calmodulin binding protein central domain 244 307 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02702 Vian-Chr2 47919816 47922169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02702 45 321 Calmodulin-binding Proteins AT2G24300 35.640 1.09e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02702 - - var:108327130 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02702 2 47919816 47922169 Vian2g02702 2 47919816 47922169 ECH